G572253


Basic Information

Item Value
gene id G572253
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8604855 ~ 8605723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652435
GTGCTGAAGAGGTTATATATGAGGTTACAAAGTTATGTATGGTGCTGAAGAGGTTATATATGAGGTTACAAAGTGGTTAAATAACATAATAAAGCTTCAAATCCACCCTTTTGTTATAAAGAATGTTGCTTGTGACTTATAAACACATCAACTTGTTTGTTACTTATATTGTCTTTGTTTCGACACGTACTAGAATCTCCCCATCGTTTAGTAGCTTCACTTTATTGTCTTTGTTTAGACACCTACTAGTATCTCCCCATCGTTTAGTAGCTTCACTTTATTGTCTTTGTTTAGACACCTACTAGTATCTCCCCATCGTTTAGTAGCTTCACTTTGTCTTTGTTTCGACACGTACTAGTATTAAAACCTTGGAGGGATTAAGCCTATAGAACATCTCACAGTAGGAGGATTTGAAGCCAACAAAAGCTAAAAGAGACAGTTTATTATGCTGACCCCATAGAAATGAAGGGTGGATCAACTGTAAATACGCAATGTATAAAAGGTCGACTGCAACACTAAATGAACACAAACATCCCCACGGGAGCGGGTTTGTAATGACTCTAAATACAACATGTAGATTAGATAGATAATGGATACAGACAACAGTTCAATTGTAATAGTTAGAGAAGTATTGGCTCTGCATACAGCTTGATCTTACCTGACAAAGTTGTCATCTCTGCAGGGAAAACAGTGATAGAGCAGATGTTTTGGTCAATGTTTACTTGACCTCTGACCCAGATCTGCAAGGGCTGTTGTTTACTTTTCCTCTCTGACCCAGATCTGCAAGGGCTGTTGTTTACTTTTCCTCTCTGACCCAGATCTGCAAGGGCTGTTGTTTACTTTTCCTCTCTGACCCAGATCTGCAAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652435 True 869 lncRNA 0.39 1 8604855 8605723

Neighbor

gene id symbol gene type direction distance location
LOC110527267 LOC106575871 coding upstream 6515 8597362 ~ 8598340 (+)
LOC118965341 LOC106575870 coding upstream 11993 8590381 ~ 8592862 (+)
LOC110496917 LOC106595105 coding upstream 18141 8585033 ~ 8586714 (+)
LOC110495575 LOC106598167 coding upstream 26816 8576739 ~ 8578039 (+)
LOC110527258 cacnb4 coding upstream 101724 8478746 ~ 8503131 (+)
LOC110527268 LOC106575873 coding downstream 2961 8608684 ~ 8609863 (+)
LOC110527270 LOC106574807 coding downstream 14940 8620663 ~ 8626882 (+)
LOC118965237 LOC106574888 coding downstream 282289 8888012 ~ 8890717 (+)
LOC110512356 LOC106575836 coding downstream 304968 8910691 ~ 8912800 (+)
LOC110527273 LOC106574813 coding downstream 548214 9153937 ~ 9159959 (+)
G572249 NA non-coding upstream 7705 8596879 ~ 8597150 (+)
G572177 NA non-coding upstream 63713 8540943 ~ 8541142 (+)
G572173 NA non-coding upstream 66081 8538551 ~ 8538774 (+)
G572154 NA non-coding upstream 96943 8506186 ~ 8507912 (+)
G572134 NA non-coding upstream 132348 8471423 ~ 8472507 (+)
G572255 NA non-coding downstream 4588 8610311 ~ 8610698 (+)
G572256 NA non-coding downstream 5539 8611262 ~ 8611479 (+)
G572260 NA non-coding downstream 8464 8614187 ~ 8614424 (+)
G572262 NA non-coding downstream 9801 8615524 ~ 8615754 (+)
G572303 NA non-coding downstream 33665 8639388 ~ 8639656 (+)
G570834 NA other upstream 464093 8140282 ~ 8140762 (+)
G570875 NA other upstream 519102 8084271 ~ 8085753 (+)
G570868 NA other upstream 525515 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 533297 8063107 ~ 8071558 (+)
LOC110497026 ptprn other upstream 551124 8009587 ~ 8061480 (+)
G572315 NA other downstream 44257 8649980 ~ 8650898 (+)
G572476 NA other downstream 316612 8922335 ~ 8922794 (+)
G572449 NA other downstream 324386 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1360944 9879599 ~ 9980430 (+)
G573366 NA other downstream 1522398 10128121 ~ 10132016 (+)

Expression


Co-expression Network