G572309


Basic Information

Item Value
gene id G572309
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8644551 ~ 8645976 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652501
aaatatggaagagacatttcagttgaaggcaggTTTCTCCCTTTAAACATATTCCCGTGTCAAACATATCCTTACAGAGAACTGTGTGTTTAACAAAAATCAATGTGAATAGTACGCCTAGTTAATCTAGTGACCTCTGTGTACTCTGCAGATACATTCAATGGACCTTATTCACATATCAGAGTCTCAGAgtagcagtgctgatctaggatcaggtcccctttGTTTATATCATCTTATTCTGTAATGATGATCCTAAAAGgacatctgatcctagatcagccgtCCTACCCTGAGactctttgtgaatacaggccaaGGTCTTCCATTATTGTCAGTTTCACTTTAatgttcaaatagtatttaaacccTGGTCAGGAGTATTCAACTGTCACTAACTGTCACTAAAGTATTCAACTGTCACTAACTGTCACTAAAGTATTCAACTGTCACTAACTGTCACTAAAGTATTCAACTGTCACTAACTGTCACTAAAGTATTCACTGTCACTAACTGTCACTAAAGTATTCAACTGTCACTAACTGTCACTAAAGTATTCACTGTCACTAACTGTCACTAAAATATTCAACTGTCACTAACTGTCACTAAAGTATTCACTGTCACTAACTGTCACTAAAGTATTCAACTGTCACTAACTGTCACTAAAGTATTCAACTGTCACTAACTGTCACTAAAGTATTCACTGTCACTAACTGTCACTAAAGTATTCAACTGTCACTAACTGTCACTAAAGTATTCACTGTCACTAACTGTCACTAAAGTATTCAACTGTCACTAACTGTCACTCAAGTATTCACTGTCACTAACTGTCACTAAAGTATTCAACTGTCACTAACTGTCACTCAAGTATTCACTGTCACTAACTGTCACTAAAGTATTCACTGTCACTAACTGTCACTAAAGTATTCACTGTCACTAACGAGTAGCCATTCTATAGTCTCCCAACAGGGAGCAGTAGAGTCTGGATAAGGACAGAGCCAGCGGCCCCCTACAGGCTTCATGCACTGGATCCTCCTCAACCAGAACTACATACTCACTGTGAGTGAACACTTCTGTACCCTTCTACAATCTACACCATACTAACTGAATGTGTCATCCTTCTACAATCTATACCATACTAACTGAATGTGTCATCCTTCTACAATCTATACCATACTAACTGAATGTGTCATCCTTCTACAATCTACACCATACTAACTGAATGTGTCATCCTTCTACAATCTACACCATACTAACTGAATGTGTCATCCTTCTACAATCTACACCATACTAACTAAATGTGTCATCCTTCTATAATCTACACCATACTAACTGAATGTGTCATCCTTCTACAATCTACACCATACTAACTGAATGTGTCATCCTTCTACAATCTACACCATACTAACTGAATGTGTCATCCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652501 True 1426 lncRNA 0.38 1 8644551 8645976

Neighbor

gene id symbol gene type direction distance location
LOC110527270 LOC106574807 coding upstream 17669 8620663 ~ 8626882 (+)
LOC110527268 LOC106575873 coding upstream 34688 8608684 ~ 8609863 (+)
LOC110527267 LOC106575871 coding upstream 46211 8597362 ~ 8598340 (+)
LOC118965341 LOC106575870 coding upstream 51689 8590381 ~ 8592862 (+)
LOC110496917 LOC106595105 coding upstream 57837 8585033 ~ 8586714 (+)
LOC118965237 LOC106574888 coding downstream 242036 8888012 ~ 8890717 (+)
LOC110512356 LOC106575836 coding downstream 264715 8910691 ~ 8912800 (+)
LOC110527273 LOC106574813 coding downstream 507961 9153937 ~ 9159959 (+)
LOC110515808 LOC106575810 coding downstream 539299 9185275 ~ 9664625 (+)
LOC118965238 LOC106575811 coding downstream 1018706 9664682 ~ 9669888 (+)
G572303 NA non-coding upstream 4895 8639388 ~ 8639656 (+)
G572262 NA non-coding upstream 28797 8615524 ~ 8615754 (+)
G572260 NA non-coding upstream 30127 8614187 ~ 8614424 (+)
G572256 NA non-coding upstream 33072 8611262 ~ 8611479 (+)
G572255 NA non-coding upstream 33853 8610311 ~ 8610698 (+)
G572311 NA non-coding downstream 448 8646424 ~ 8647117 (+)
G572322 NA non-coding downstream 11624 8657600 ~ 8658430 (+)
G572337 NA non-coding downstream 29292 8675268 ~ 8675484 (+)
G572340 NA non-coding downstream 32367 8678343 ~ 8678631 (+)
G572342 NA non-coding downstream 35029 8681005 ~ 8681212 (+)
G570834 NA other upstream 503789 8140282 ~ 8140762 (+)
G570875 NA other upstream 558798 8084271 ~ 8085753 (+)
G570868 NA other upstream 565211 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 572993 8063107 ~ 8071558 (+)
LOC110497026 ptprn other upstream 590820 8009587 ~ 8061480 (+)
G572315 NA other downstream 4004 8649980 ~ 8650898 (+)
G572476 NA other downstream 276359 8922335 ~ 8922794 (+)
G572449 NA other downstream 284133 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1320691 9879599 ~ 9980430 (+)
G573366 NA other downstream 1482145 10128121 ~ 10132016 (+)

Expression


Co-expression Network