G572340


Basic Information

Item Value
gene id G572340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8678343 ~ 8678631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652532
tgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgagtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652532 True 289 lncRNA 0.50 1 8678343 8678631

Neighbor

gene id symbol gene type direction distance location
LOC110527270 LOC106574807 coding upstream 51461 8620663 ~ 8626882 (+)
LOC110527268 LOC106575873 coding upstream 68480 8608684 ~ 8609863 (+)
LOC110527267 LOC106575871 coding upstream 80003 8597362 ~ 8598340 (+)
LOC118965341 LOC106575870 coding upstream 85481 8590381 ~ 8592862 (+)
LOC110496917 LOC106595105 coding upstream 91629 8585033 ~ 8586714 (+)
LOC118965237 LOC106574888 coding downstream 209381 8888012 ~ 8890717 (+)
LOC110512356 LOC106575836 coding downstream 232060 8910691 ~ 8912800 (+)
LOC110527273 LOC106574813 coding downstream 475306 9153937 ~ 9159959 (+)
LOC110515808 LOC106575810 coding downstream 506644 9185275 ~ 9664625 (+)
LOC118965238 LOC106575811 coding downstream 986051 9664682 ~ 9669888 (+)
G572337 NA non-coding upstream 2859 8675268 ~ 8675484 (+)
G572322 NA non-coding upstream 19913 8657600 ~ 8658430 (+)
G572311 NA non-coding upstream 31226 8646424 ~ 8647117 (+)
G572309 NA non-coding upstream 32367 8644551 ~ 8645976 (+)
G572303 NA non-coding upstream 38687 8639388 ~ 8639656 (+)
G572342 NA non-coding downstream 2374 8681005 ~ 8681212 (+)
G572351 NA non-coding downstream 52275 8730906 ~ 8731314 (+)
G572353 NA non-coding downstream 52748 8731379 ~ 8731602 (+)
G572361 NA non-coding downstream 64344 8742975 ~ 8743549 (+)
G572364 NA non-coding downstream 69438 8748069 ~ 8749136 (+)
G572315 NA other upstream 27445 8649980 ~ 8650898 (+)
G570834 NA other upstream 537581 8140282 ~ 8140762 (+)
G570875 NA other upstream 592590 8084271 ~ 8085753 (+)
G570868 NA other upstream 599003 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 606785 8063107 ~ 8071558 (+)
G572476 NA other downstream 243704 8922335 ~ 8922794 (+)
G572449 NA other downstream 251478 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1288036 9879599 ~ 9980430 (+)
G573366 NA other downstream 1449490 10128121 ~ 10132016 (+)
LOC110527289 LOC106590510 other downstream 1500788 10173615 ~ 10233047 (+)

Expression


Co-expression Network