XLOC_025117 (cyp2k16)


Basic Information

Item Value
gene id XLOC_025117
gene name cyp2k16
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 12764894 ~ 12780758 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049646
CACTCCTGCTCGGTATGTGTTACTGTTTAGGTCTGAGCCAGTTTTTTAGGGTATAGTTGAGTGAACATGGCGTTCCTGGACGCACTTCTTCATGTTTCCAGCACAGGAACATTAATCTGCTTTTTGCTGCTGCTCCTGGTTGCTTATCTCCTGTTCTTAAGATCTCAAAGTGACGAAAATGAACCTCCAGGGCCAAAACCGTTGCCACTGTTGGGAAATCTACTCATGCTGGATGTCAACAAACCACATTTGAGCCTGTGTGAGATGGCAAAGCAGTTCGGCCCagtttttaaagtctactttgGTCCGAAGAAAGTGGTTGTGCTTGCCGGCTACAAAGCAGTGAAGCAAGCGCTTGTTAATTATGCAGAAGCATTTGGAGACAGAGAAATCATGCCACTTTTCCATGATTTCACCAAAGGTCATGGAATAATATTTGCCAATGGAGAGAGCTGGAGAGAGATGAGACGGTTTGCTCTCACCAATTTACGAGACTTTGGGAtgggaaagaaaaaaattgaggaGAAAATCATCGAGGAAACATGCCATTTACGAGAGGAGTTTGAGAAGTTTGAAGgaaagCCTTTTGAAACCGCACAActcatgaactatgcagcttcaAGTGTCATCTCCTCCATTGTGTATGGCCGCAGATTCGAGTATACAGATCCTCAGCTACGGACCATGGTGGATCGAGCTAATGAGAGCGTCAGACTGAGTGGATCAGCATCAGTACAGCTCTACAACATGTTCCCTTTCTTGGGCCCGTTGCTCAAAAACTGGAGACAGCTCATGAAAAACCTACATCTTGATATTGAAGAGATTTCAGAGCTGGTGAACGGTTTACATCAAACATTAAACCATCAGGACCTCAGAGGATTTGTTGATTCGTTTCTTGTCAGGAAGCAGTATGCAGagGATTCTGGAGAGAAGGATTCACATTTCCATGAACAGAACCTCATTTACACAGTAGGAAATCTGTTTGTCGCTGGTACGGACACTACTAGCACAACACTGCGCTGGAGTCTGCTGCTGATGGCCAAATATCCACACATACAGGATCGAGTTCAGGAGGAGATTGACCAGGTAATCGGTGGCCGACAACCGGTTTCAGAAGACAGGAAGAACTTACCATATACAGATGCTGTTATCCATGAAACCCAACGACTGGCCAACATAGTACCCATGAGCATCCCTCATATGACCAGCTCTGACATTACCTTCAATGGATACTTCATCAAGAAGGGTACTTGTATATTTCCTCTACTAACCTCTGTACTGTGGGATGAGGATGAATGGGAAACACCCCACATCTTTAACCCCAATCACTTTCTGGATGAGCAGGGTCGATTTGTGAAAAGAGACGCATTCATGCCCTTCTCTGCAGGGCGCAGGATTTGTCTTGGAGAGAGTTTGGCCAGGATGGAGCTCTTCCTCTTCTTTACATCTCTCCTTCAGTATTTCCGCTTCACTCCTCCTCCTGGAGTGTCTGAAGATGAGCTGGAACTCACACCAGCCGTAGGCTTTACACTGAACCCGATCGCACATAAACTGTGTGCAGTTAAGCGGTTGTGAAGTCTGTTACAGTAAAGTTGTTCTCATGTGTTCAAACAAAAGTCACTTGTATTTGTCACAAAATAGTATGAAAGCATGATATAGAAATTAATCTCATCTATTTTGTTAATGcatgttattttaaatgattcagcTGGAAGCAACAACTGATGCATTGTTCCAAGTCTCCTTCCAAGTATatgaatgaagatttttttttttgtttttttttaagcgtTCTTTATTACATTTTTGCCTAAATGTAGATTTGTGTTACAGAGGATAAATATTAAATGCTTTGACCAATaatttaaacaa

Function

symbol description
cyp2k16 Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in exogenous drug catabolic process; organic acid metabolic process; and xenobiotic metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Is expressed in epidermis; gut; periderm; and yolk syncytial layer.

GO:

id name namespace
GO:0042738 exogenous drug catabolic process biological_process
GO:0006082 organic acid metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008395 steroid hydroxylase activity molecular_function
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041010-37 Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in exogenous drug catabolic process; organic acid metabolic process; and xenobiotic metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Is expressed in epidermis; gut; periderm; and yolk syncytial layer.

Ensembl:

ensembl_id ENSDARG00000102981

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049646 True 1872 mRNA 0.43 9 12764894 12780758

Neighbor

gene id symbol gene type direction distance location
XLOC_025116 cyp2k17 coding upstream 1775 12755535 ~ 12763119 (+)
XLOC_025115 cyp2k21 coding upstream 15696 12744083 ~ 12749198 (+)
XLOC_025114 cyp2k19 coding upstream 24584 12732382 ~ 12740310 (+)
XLOC_025113 cyp2k20 coding upstream 34340 12718100 ~ 12730554 (+)
XLOC_025112 cyp2k18 coding upstream 49462 12710350 ~ 12715432 (+)
XLOC_025118 cyp2k8 coding downstream 3702 12784460 ~ 12802380 (+)
XLOC_025119 cyp2k6 coding downstream 35604 12816362 ~ 12826387 (+)
XLOC_025120 si:ch211-8c17.2 coding downstream 48066 12828824 ~ 12832519 (+)
XLOC_025121 si:ch211-8c17.3 coding downstream 54612 12835370 ~ 12837643 (+)
XLOC_025122 NA coding downstream 57936 12838694 ~ 12854479 (+)
XLOC_025429 BX649540.1 misc downstream 17467981 30248739 ~ 30249036 (+)
XLOC_025107 NA non-coding upstream 500436 12239692 ~ 12264458 (+)
XLOC_025106 NA non-coding upstream 683521 12076852 ~ 12081373 (+)
XLOC_025105 NA non-coding upstream 689759 12074888 ~ 12075135 (+)
XLOC_025103 NA non-coding upstream 906091 11855320 ~ 11858803 (+)
XLOC_025102 NA non-coding upstream 1184174 11576675 ~ 11580720 (+)
XLOC_025125 LO018183.1 non-coding downstream 368792 13149550 ~ 13167328 (+)
XLOC_025128 NA non-coding downstream 579945 13360703 ~ 13367508 (+)
XLOC_025129 NA non-coding downstream 609104 13389862 ~ 13406082 (+)
XLOC_025130 dre-mir-23a-2 non-coding downstream 625468 13406226 ~ 13406323 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000208_00679245_00685898 CYP2K16, CYP2K19 coding CI01000208 null 679245 ~ 685908 (+)