G572342


Basic Information

Item Value
gene id G572342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8681005 ~ 8681212 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652534
ctgtagtgtggttttccactttaattttgagtgtgactccaaatccagacctcaatgggttgataaatttgatttccattgataatttttgtgtgattttgttgtcagcacattcaactatgtaaagaaaaaagtatttaataagaatatttcattcattcagatctaggatgtgttgttttagtgttccctttatttgtttgagcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652534 True 208 lncRNA 0.31 1 8681005 8681212

Neighbor

gene id symbol gene type direction distance location
LOC110527270 LOC106574807 coding upstream 54123 8620663 ~ 8626882 (+)
LOC110527268 LOC106575873 coding upstream 71142 8608684 ~ 8609863 (+)
LOC110527267 LOC106575871 coding upstream 82665 8597362 ~ 8598340 (+)
LOC118965341 LOC106575870 coding upstream 88143 8590381 ~ 8592862 (+)
LOC110496917 LOC106595105 coding upstream 94291 8585033 ~ 8586714 (+)
LOC118965237 LOC106574888 coding downstream 206800 8888012 ~ 8890717 (+)
LOC110512356 LOC106575836 coding downstream 229479 8910691 ~ 8912800 (+)
LOC110527273 LOC106574813 coding downstream 472725 9153937 ~ 9159959 (+)
LOC110515808 LOC106575810 coding downstream 504063 9185275 ~ 9664625 (+)
LOC118965238 LOC106575811 coding downstream 983470 9664682 ~ 9669888 (+)
G572340 NA non-coding upstream 2374 8678343 ~ 8678631 (+)
G572337 NA non-coding upstream 5521 8675268 ~ 8675484 (+)
G572322 NA non-coding upstream 22575 8657600 ~ 8658430 (+)
G572311 NA non-coding upstream 33888 8646424 ~ 8647117 (+)
G572309 NA non-coding upstream 35029 8644551 ~ 8645976 (+)
G572351 NA non-coding downstream 49694 8730906 ~ 8731314 (+)
G572353 NA non-coding downstream 50167 8731379 ~ 8731602 (+)
G572361 NA non-coding downstream 61763 8742975 ~ 8743549 (+)
G572364 NA non-coding downstream 66857 8748069 ~ 8749136 (+)
G572365 NA non-coding downstream 68426 8749638 ~ 8749942 (+)
G572315 NA other upstream 30107 8649980 ~ 8650898 (+)
G570834 NA other upstream 540243 8140282 ~ 8140762 (+)
G570875 NA other upstream 595252 8084271 ~ 8085753 (+)
G570868 NA other upstream 601665 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 609447 8063107 ~ 8071558 (+)
G572476 NA other downstream 241123 8922335 ~ 8922794 (+)
G572449 NA other downstream 248897 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1285455 9879599 ~ 9980430 (+)
G573366 NA other downstream 1446909 10128121 ~ 10132016 (+)
LOC110527289 LOC106590510 other downstream 1498207 10173615 ~ 10233047 (+)

Expression


Co-expression Network