G572364


Basic Information

Item Value
gene id G572364
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8748069 ~ 8749136 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652558
ttatcattgactcagtactgatactgcttgtatatagtcaagttatcattgactcagtactgatactccttgtatttagtcaggttatcattgacttggtactgatacCTCTTGTATTTAGTCAGgttatcattgacttggtactgatactccttgtatatagtcaggttatcattgacttggtactgatactccttgtatttagtcaggttatcattgacttggtactgatacCTCTTGTATTTAGTCAGgttatcattgacttggtactgatactccttgtatttagtcaggttatcattgacttggtactgatactccttgtatttagtcaggttatcattgacttggtac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106589733

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652558 True 354 lncRNA 0.35 3 8748069 8749136

Neighbor

gene id symbol gene type direction distance location
LOC110527270 LOC106574807 coding upstream 121187 8620663 ~ 8626882 (+)
LOC110527268 LOC106575873 coding upstream 138206 8608684 ~ 8609863 (+)
LOC110527267 LOC106575871 coding upstream 149729 8597362 ~ 8598340 (+)
LOC118965341 LOC106575870 coding upstream 155207 8590381 ~ 8592862 (+)
LOC110496917 LOC106595105 coding upstream 161355 8585033 ~ 8586714 (+)
LOC118965237 LOC106574888 coding downstream 138876 8888012 ~ 8890717 (+)
LOC110512356 LOC106575836 coding downstream 161555 8910691 ~ 8912800 (+)
LOC110527273 LOC106574813 coding downstream 404801 9153937 ~ 9159959 (+)
LOC110515808 LOC106575810 coding downstream 436139 9185275 ~ 9664625 (+)
LOC118965238 LOC106575811 coding downstream 915546 9664682 ~ 9669888 (+)
G572361 NA non-coding upstream 4520 8742975 ~ 8743549 (+)
G572353 NA non-coding upstream 16467 8731379 ~ 8731602 (+)
G572351 NA non-coding upstream 16755 8730906 ~ 8731314 (+)
G572342 NA non-coding upstream 66857 8681005 ~ 8681212 (+)
G572340 NA non-coding upstream 69438 8678343 ~ 8678631 (+)
G572365 NA non-coding downstream 502 8749638 ~ 8749942 (+)
G572367 NA non-coding downstream 1589 8750725 ~ 8751039 (+)
G572372 NA non-coding downstream 6020 8755156 ~ 8755391 (+)
G572373 NA non-coding downstream 6333 8755469 ~ 8755705 (+)
G572376 NA non-coding downstream 7680 8756816 ~ 8757040 (+)
G572315 NA other upstream 97171 8649980 ~ 8650898 (+)
G570834 NA other upstream 607307 8140282 ~ 8140762 (+)
G570875 NA other upstream 662316 8084271 ~ 8085753 (+)
G570868 NA other upstream 668729 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 676511 8063107 ~ 8071558 (+)
G572476 NA other downstream 173199 8922335 ~ 8922794 (+)
G572449 NA other downstream 180973 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1217531 9879599 ~ 9980430 (+)
G573366 NA other downstream 1378985 10128121 ~ 10132016 (+)
LOC110527289 LOC106590510 other downstream 1430283 10173615 ~ 10233047 (+)

Expression


Co-expression Network