G572470


Basic Information

Item Value
gene id G572470
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8902857 ~ 8903491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652685
TATTTGAAATAAACAGCAACTGAAAATATGTTCAATTAAAAACCGATACATTTCCCAGCTAAAGGGCCTACACAGTAAGCAAAGAAAACCGCCCTACATCACCATCTGTCCGTGTGCCAAACTACACCACAGGGTAGTTAGAGGCTTCCTCACCATGGTCAGTGTGTGGTGTCAGACACTCCATCCCTTCTTGCAGATCTGGAGTGTATGAGTAAGTATCAGTGGTGGAGCTGCCACCATACAGATCTGGGCGTGATTTGGGACCAGCTGTGTGTGTCGATGGTGCCAGTGAGTGTCTAGTTTAGGAAGACCTTCGGTGCATCCTCAGCCTGTCCTGTGTGTGTAGCAGGTCCAGCTTTAGGACAGCACGGCGTGGGTGGTTCGGACACCCACCAGATTGTCTGCGCTGAGGGACCTCCTTATGGTCACCTTGCCCAGATCCTTGTATTTGTCCTCACACAGTCTGGAGATAGCC
>TU652686
TATTTGAAATAAACAGCAACTGAAAATATGTTCAATTAAAAACCGATACATTTCCCAGCTAAAGGGCCTACACAGTAAGCAAAGAAAACCGCCCTACATCACCATCTGTCCGTGTGCCAAACTACACCACAGGGTAGTTAGAGGCTTCCTCACCATGGTCAGTGTGTGGTGTCAGACACTCCATCCCTTCTTGCAGATCTGGAGTGTATGAGTAAGTATCAGTGGTGGAGCTGCCACCATACAGATCTGGGCGTGATTTGGGACCAGCTGTGTGTGTCGATGGTGCCAGTGAGTGTCTAGTTTAGGAAGACCTTCGGTGCATCCTCAGCCTGTCCTGTGTGTGTAGCAGGTCCAGCTTTAGGACAGCACGGCGTGGGTGGTTCGGACACCCACCAGATTGTCTGCGCTGAGGGACCTCCTTATGGTCACCTTGCCCAGATCCTTGTATTTGTCCTCACACAGTCTGGAGATAGCCTGGGAACGCAACAACACTTATTACAGCCCAGAGATAGCCTGGGAACAATTTTTTAGTAACTACATGATAGTAGGGGA
>TU652687
TATTTGAAATAAACAGCAACTGAAAATATGTTCAATTAAAAACCGATACATTTCCCAGCTAAAGGGCCTACACAGTAAGCAAAGAAAACCGCCCTACATCACCATCTGTCCGTGTGCCAAACTACACCACAGGGTAGTTAGAGGCTTCCTCACCATGGTCAGTGTGTGGTGTCAGACACTCCATCCCTTCTTGCAGATCTGGAGTGTATGAGTAAGTATCAGTGGTGGAGCTGCCACCATACAGATCTGGGCGTGATTTGGGACCAGCTGTGTGTGTCGATGGTGCCAGTGAGTGTCTAGTTTAGGAAGACCTTCGGTGCATCCTCAGCCTGTCCTGTGTGTGTAGCAGGTCCAGCTTTAGGACAGCACGGCGTGGGTGGTTCGGACACCCACCAGATTGTCTGCGCTGAGGGACCTCCTTATGGTCACCTTGCCCAGATCCTTGTATTTGTCCTCACACAGTCTGGAGATAGCCTGGGAACGCAACAACACTTATTACAGCCCAGAGATAGCCTGGGAACAATTTTTTAGTAACTACATGATAGTAGGGGAGTAGGGGCTGGGGTTGTTTCTGAACAGGACCAAGTCAACCAGGACAACCATTAAACTCCCCTCTTGCCAAGTAGCAGTGTTTT

Function

NR:

description
cyclin-Y-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652685 False 475 lncRNA 0.50 1 8902857 8903331
TU652686 False 552 lncRNA 0.49 1 8902857 8903408
TU652687 True 635 lncRNA 0.49 1 8902857 8903491

Neighbor

gene id symbol gene type direction distance location
LOC118965237 LOC106574888 coding upstream 12140 8888012 ~ 8890717 (+)
LOC110527270 LOC106574807 coding upstream 275975 8620663 ~ 8626882 (+)
LOC110527268 LOC106575873 coding upstream 292994 8608684 ~ 8609863 (+)
LOC110527267 LOC106575871 coding upstream 304517 8597362 ~ 8598340 (+)
LOC118965341 LOC106575870 coding upstream 309995 8590381 ~ 8592862 (+)
LOC110512356 LOC106575836 coding downstream 7200 8910691 ~ 8912800 (+)
LOC110527273 LOC106574813 coding downstream 250446 9153937 ~ 9159959 (+)
LOC110515808 LOC106575810 coding downstream 281784 9185275 ~ 9664625 (+)
LOC118965238 LOC106575811 coding downstream 761191 9664682 ~ 9669888 (+)
LOC110527090 LOC106575822 coding downstream 841850 9745341 ~ 9758984 (+)
G572465 NA non-coding upstream 24810 8877847 ~ 8878047 (+)
G572457 LOC106593457 non-coding upstream 37943 8864628 ~ 8864914 (+)
G572379 NA non-coding upstream 144747 8757761 ~ 8758110 (+)
G572377 NA non-coding upstream 145273 8757248 ~ 8757584 (+)
G572472 NA non-coding downstream 1109 8904600 ~ 8905193 (+)
G572473 NA non-coding downstream 4594 8908085 ~ 8908700 (+)
G572475 NA non-coding downstream 15287 8918778 ~ 8919645 (+)
G572567 NA non-coding downstream 116400 9019891 ~ 9020138 (+)
G572604 NA non-coding downstream 164055 9067546 ~ 9067895 (+)
G572315 NA other upstream 251959 8649980 ~ 8650898 (+)
G570834 NA other upstream 762095 8140282 ~ 8140762 (+)
G570875 NA other upstream 817104 8084271 ~ 8085753 (+)
G570868 NA other upstream 823517 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 831299 8063107 ~ 8071558 (+)
G572476 NA other downstream 18844 8922335 ~ 8922794 (+)
G572449 NA other downstream 26618 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1063176 9879599 ~ 9980430 (+)
G573366 NA other downstream 1224630 10128121 ~ 10132016 (+)
LOC110527289 LOC106590510 other downstream 1275928 10173615 ~ 10233047 (+)

Expression


Co-expression Network