Gene
RNA
| Item | Value |
|---|---|
| gene id | G572472 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 8904600 ~ 8905193 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cyclin-Y-like protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU652690 | True | 555 | lncRNA | 0.55 | 2 | 8904600 | 8905193 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965237 | LOC106574888 | coding | upstream | 13883 | 8888012 ~ 8890717 (+) |
| LOC110527270 | LOC106574807 | coding | upstream | 277718 | 8620663 ~ 8626882 (+) |
| LOC110527268 | LOC106575873 | coding | upstream | 294737 | 8608684 ~ 8609863 (+) |
| LOC110527267 | LOC106575871 | coding | upstream | 306260 | 8597362 ~ 8598340 (+) |
| LOC118965341 | LOC106575870 | coding | upstream | 311738 | 8590381 ~ 8592862 (+) |
| LOC110512356 | LOC106575836 | coding | downstream | 5498 | 8910691 ~ 8912800 (+) |
| LOC110527273 | LOC106574813 | coding | downstream | 248744 | 9153937 ~ 9159959 (+) |
| LOC110515808 | LOC106575810 | coding | downstream | 280082 | 9185275 ~ 9664625 (+) |
| LOC118965238 | LOC106575811 | coding | downstream | 759489 | 9664682 ~ 9669888 (+) |
| LOC110527090 | LOC106575822 | coding | downstream | 840148 | 9745341 ~ 9758984 (+) |
| G572470 | NA | non-coding | upstream | 1109 | 8902857 ~ 8903491 (+) |
| G572465 | NA | non-coding | upstream | 26553 | 8877847 ~ 8878047 (+) |
| G572457 | LOC106593457 | non-coding | upstream | 39686 | 8864628 ~ 8864914 (+) |
| G572379 | NA | non-coding | upstream | 146490 | 8757761 ~ 8758110 (+) |
| G572473 | NA | non-coding | downstream | 2892 | 8908085 ~ 8908700 (+) |
| G572475 | NA | non-coding | downstream | 13585 | 8918778 ~ 8919645 (+) |
| G572567 | NA | non-coding | downstream | 114698 | 9019891 ~ 9020138 (+) |
| G572604 | NA | non-coding | downstream | 162353 | 9067546 ~ 9067895 (+) |
| G572610 | NA | non-coding | downstream | 170251 | 9075444 ~ 9075890 (+) |
| G572315 | NA | other | upstream | 253702 | 8649980 ~ 8650898 (+) |
| G570834 | NA | other | upstream | 763838 | 8140282 ~ 8140762 (+) |
| G570875 | NA | other | upstream | 818847 | 8084271 ~ 8085753 (+) |
| G570868 | NA | other | upstream | 825260 | 8077745 ~ 8079340 (+) |
| G570827 | LOC107379067 | other | upstream | 833042 | 8063107 ~ 8071558 (+) |
| G572476 | NA | other | downstream | 17142 | 8922335 ~ 8922794 (+) |
| G572449 | NA | other | downstream | 24916 | 8930109 ~ 8933878 (+) |
| LOC110497049 | LOC106575743 | other | downstream | 1061474 | 9879599 ~ 9980430 (+) |
| G573366 | NA | other | downstream | 1222928 | 10128121 ~ 10132016 (+) |
| LOC110527289 | LOC106590510 | other | downstream | 1274226 | 10173615 ~ 10233047 (+) |
