G572615


Basic Information

Item Value
gene id G572615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 9093901 ~ 9112416 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652862
gtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtatgttaggaggtagggagagtaaagacagtagtttgtgctgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatgtgttgtatgtaaggaggtagg
>TU652858
gtttgtgttgtatgtaaggaggtagggagagtgaagacagttgtttgtgttgtatgtaaggaggaagggagagtaaagacagtagtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatgttaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtttg
>TU652866
gagtgaagacagtagtttgtgttgtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtatctaaggaggtagggagagtgaagacagtagtttgtgttgtatgtaaggaggtagggagagt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652862 False 296 lncRNA 0.41 3 9093901 9103682
TU652858 False 284 lncRNA 0.40 2 9100677 9111219
TU652866 True 223 lncRNA 0.43 3 9105729 9112416

Neighbor

gene id symbol gene type direction distance location
LOC110512356 LOC106575836 coding upstream 181101 8910691 ~ 8912800 (+)
LOC118965237 LOC106574888 coding upstream 203184 8888012 ~ 8890717 (+)
LOC110527270 LOC106574807 coding upstream 467019 8620663 ~ 8626882 (+)
LOC110527268 LOC106575873 coding upstream 484038 8608684 ~ 8609863 (+)
LOC110527267 LOC106575871 coding upstream 495561 8597362 ~ 8598340 (+)
LOC110527273 LOC106574813 coding downstream 41521 9153937 ~ 9159959 (+)
LOC110515808 LOC106575810 coding downstream 72859 9185275 ~ 9664625 (+)
LOC118965238 LOC106575811 coding downstream 552266 9664682 ~ 9669888 (+)
LOC110527090 LOC106575822 coding downstream 632925 9745341 ~ 9758984 (+)
LOC100135948 LOC100194643 coding downstream 650786 9763202 ~ 9769681 (+)
G572610 NA non-coding upstream 18011 9075444 ~ 9075890 (+)
G572604 NA non-coding upstream 26006 9067546 ~ 9067895 (+)
G572567 NA non-coding upstream 73763 9019891 ~ 9020138 (+)
G572475 NA non-coding upstream 174256 8918778 ~ 8919645 (+)
G572473 NA non-coding upstream 185201 8908085 ~ 8908700 (+)
G572621 NA non-coding downstream 31874 9144290 ~ 9145600 (+)
G572646 NA non-coding downstream 51877 9164293 ~ 9164552 (+)
G572651 NA non-coding downstream 69923 9182339 ~ 9182683 (+)
G572653 NA non-coding downstream 76310 9188726 ~ 9190294 (+)
G572702 NA non-coding downstream 195963 9308379 ~ 9309804 (+)
G572449 NA other upstream 160023 8930109 ~ 8933878 (+)
G572476 NA other upstream 171107 8922335 ~ 8922794 (+)
G572315 NA other upstream 443003 8649980 ~ 8650898 (+)
G570834 NA other upstream 953139 8140282 ~ 8140762 (+)
G570875 NA other upstream 1008148 8084271 ~ 8085753 (+)
LOC110497049 LOC106575743 other downstream 854251 9879599 ~ 9980430 (+)
G573366 NA other downstream 1015705 10128121 ~ 10132016 (+)
LOC110527289 LOC106590510 other downstream 1067003 10173615 ~ 10233047 (+)
G574038 NA other downstream 1763691 10876107 ~ 10877184 (+)
G574122 NA other downstream 1891088 11003504 ~ 11076001 (+)

Expression


Co-expression Network