G572614


Basic Information

Item Value
gene id G572614
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 9107404 ~ 9112031 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU652850
agggagagtgaagacagtagtttgtgttgtttgtgttgtatctaaggaggtatggagagtgaagacagtagtttgtgttgtatgtgaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtgaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatgtgaggtagggagagggagagtgaagacagtagtttgtgttgtttgtgttgtatctaaggaggtatggagagtgaagacagtagtttgtgttgtatgtgaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtgaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatgtgaggtaggga
>TU652851
agggagagtgaagacagtagtttgtgttgtttgtgttgtatctaaggaggtatggagagtgaagacagtagtttgtgttgtatgtgaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtgaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatgtgaggtagggagagggagagtgaagacagtagtttgtgttgtttgtgttgtatctaaggaggtatggagagtgaagacagtagtttgtgttgtatgtgaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtgaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatgtgaggtaggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU652850 False 710 lncRNA 0.41 3 9107404 9112031
TU652851 True 710 lncRNA 0.41 3 9107404 9112031

Neighbor

gene id symbol gene type direction distance location
LOC110512356 LOC106575836 coding upstream 194604 8910691 ~ 8912800 (+)
LOC118965237 LOC106574888 coding upstream 216687 8888012 ~ 8890717 (+)
LOC110527270 LOC106574807 coding upstream 480522 8620663 ~ 8626882 (+)
LOC110527268 LOC106575873 coding upstream 497541 8608684 ~ 8609863 (+)
LOC110527267 LOC106575871 coding upstream 509064 8597362 ~ 8598340 (+)
LOC110527273 LOC106574813 coding downstream 41906 9153937 ~ 9159959 (+)
LOC110515808 LOC106575810 coding downstream 73244 9185275 ~ 9664625 (+)
LOC118965238 LOC106575811 coding downstream 552651 9664682 ~ 9669888 (+)
LOC110527090 LOC106575822 coding downstream 633310 9745341 ~ 9758984 (+)
LOC100135948 LOC100194643 coding downstream 651171 9763202 ~ 9769681 (+)
G572610 NA non-coding upstream 31514 9075444 ~ 9075890 (+)
G572604 NA non-coding upstream 39509 9067546 ~ 9067895 (+)
G572567 NA non-coding upstream 87266 9019891 ~ 9020138 (+)
G572475 NA non-coding upstream 187759 8918778 ~ 8919645 (+)
G572473 NA non-coding upstream 198704 8908085 ~ 8908700 (+)
G572621 NA non-coding downstream 32259 9144290 ~ 9145600 (+)
G572646 NA non-coding downstream 52262 9164293 ~ 9164552 (+)
G572651 NA non-coding downstream 70308 9182339 ~ 9182683 (+)
G572653 NA non-coding downstream 76695 9188726 ~ 9190294 (+)
G572702 NA non-coding downstream 196348 9308379 ~ 9309804 (+)
G572449 NA other upstream 173526 8930109 ~ 8933878 (+)
G572476 NA other upstream 184610 8922335 ~ 8922794 (+)
G572315 NA other upstream 456506 8649980 ~ 8650898 (+)
G570834 NA other upstream 966642 8140282 ~ 8140762 (+)
G570875 NA other upstream 1021651 8084271 ~ 8085753 (+)
LOC110497049 LOC106575743 other downstream 854636 9879599 ~ 9980430 (+)
G573366 NA other downstream 1016090 10128121 ~ 10132016 (+)
LOC110527289 LOC106590510 other downstream 1067388 10173615 ~ 10233047 (+)
G574038 NA other downstream 1764076 10876107 ~ 10877184 (+)
G574122 NA other downstream 1891473 11003504 ~ 11076001 (+)

Expression


Co-expression Network