G572788


Basic Information

Item Value
gene id G572788
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 9554962 ~ 9560301 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU653065
cctcctatagcctcctataacctcctatagcctcctatagcctcctatagcctcctataaTCTCCTATAACATCCTATAGCCTCCCATAACCTCCTCTAGCCTcctaTAGCCTCCTATAGCCTCTTATGGCTTCATATTGCCTCATAtagcctcctatagcctcctatagcctcctataaTCTCCTATAACATCCTATAGCCTCCCATAACCTCCTCtagcctcctatagcctcctatagCCTCATATTGCCTCATAtagcctcctatagcctcctataaCCTCCTATAGCCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106964325 isoform X34

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU653065 True 293 lncRNA 0.46 2 9554962 9560301

Neighbor

gene id symbol gene type direction distance location
LOC110527273 LOC106574813 coding upstream 395003 9153937 ~ 9159959 (+)
LOC110512356 LOC106575836 coding upstream 642162 8910691 ~ 8912800 (+)
LOC118965237 LOC106574888 coding upstream 664245 8888012 ~ 8890717 (+)
LOC110527270 LOC106574807 coding upstream 928080 8620663 ~ 8626882 (+)
LOC110527268 LOC106575873 coding upstream 945099 8608684 ~ 8609863 (+)
LOC118965238 LOC106575811 coding downstream 104381 9664682 ~ 9669888 (+)
LOC110527090 LOC106575822 coding downstream 185040 9745341 ~ 9758984 (+)
LOC100135948 LOC100194643 coding downstream 202901 9763202 ~ 9769681 (+)
LOC110528748 acadl coding downstream 215738 9776039 ~ 9781629 (+)
LOC118965239 LOC106575823 coding downstream 222775 9783076 ~ 9876545 (+)
G572773 NA non-coding upstream 38044 9516465 ~ 9516918 (+)
G572728 NA non-coding upstream 183006 9369311 ~ 9371956 (+)
G572715 NA non-coding upstream 207105 9343803 ~ 9347857 (+)
G572716 NA non-coding upstream 208899 9344306 ~ 9346063 (+)
G572711 NA non-coding upstream 215401 9339195 ~ 9339561 (+)
G572833 NA non-coding downstream 116667 9676968 ~ 9678393 (+)
G572838 NA non-coding downstream 126968 9687269 ~ 9687644 (+)
G572851 NA non-coding downstream 158775 9719076 ~ 9719320 (+)
G572917 NA non-coding downstream 306006 9866307 ~ 9866539 (+)
G572449 NA other upstream 621084 8930109 ~ 8933878 (+)
G572476 NA other upstream 632168 8922335 ~ 8922794 (+)
G572315 NA other upstream 904064 8649980 ~ 8650898 (+)
G570834 NA other upstream 1414200 8140282 ~ 8140762 (+)
G570875 NA other upstream 1469209 8084271 ~ 8085753 (+)
LOC110497049 LOC106575743 other downstream 406366 9879599 ~ 9980430 (+)
G573366 NA other downstream 567820 10128121 ~ 10132016 (+)
LOC110527289 LOC106590510 other downstream 619118 10173615 ~ 10233047 (+)
G574038 NA other downstream 1315806 10876107 ~ 10877184 (+)
G574122 NA other downstream 1443203 11003504 ~ 11076001 (+)

Expression


Co-expression Network