G572838


Basic Information

Item Value
gene id G572838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 9687269 ~ 9687644 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU653119
gggaaccactgttggagtactgaagtactagagttgggaaccactgttggagtactgaagtactagagttgggaaccactgttgaaGTACTGAAGTACTAgagttgggaaccactgttgaagtactagagttgggaaccactgttggagtACTGAAGTACTAGAGTTGGAAACCACTGTTGAAGTACTGAAGTActagagttgggaaccactgttgaagtactagagttgggaaccactgttggagtactgaagtactagagttgggaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU653119 True 271 lncRNA 0.45 2 9687269 9687644

Neighbor

gene id symbol gene type direction distance location
LOC118965238 LOC106575811 coding upstream 17381 9664682 ~ 9669888 (+)
LOC110515808 LOC106575810 coding upstream 22644 9185275 ~ 9664625 (+)
LOC110527273 LOC106574813 coding upstream 527310 9153937 ~ 9159959 (+)
LOC110512356 LOC106575836 coding upstream 774469 8910691 ~ 8912800 (+)
LOC118965237 LOC106574888 coding upstream 796552 8888012 ~ 8890717 (+)
LOC110527090 LOC106575822 coding downstream 57697 9745341 ~ 9758984 (+)
LOC100135948 LOC100194643 coding downstream 75558 9763202 ~ 9769681 (+)
LOC110528748 acadl coding downstream 88395 9776039 ~ 9781629 (+)
LOC118965239 LOC106575823 coding downstream 95432 9783076 ~ 9876545 (+)
LOC110497049 LOC106575743 coding downstream 191955 9879599 ~ 9980430 (+)
G572833 NA non-coding upstream 8876 9676968 ~ 9678393 (+)
G572788 NA non-coding upstream 126968 9554962 ~ 9560301 (+)
G572773 NA non-coding upstream 170351 9516465 ~ 9516918 (+)
G572728 NA non-coding upstream 315313 9369311 ~ 9371956 (+)
G572715 NA non-coding upstream 339412 9343803 ~ 9347857 (+)
G572851 NA non-coding downstream 31432 9719076 ~ 9719320 (+)
G572917 NA non-coding downstream 178663 9866307 ~ 9866539 (+)
G572872 NA non-coding downstream 269404 9957048 ~ 9957419 (+)
G572948 NA non-coding downstream 293310 9980954 ~ 9981175 (+)
G572449 NA other upstream 753391 8930109 ~ 8933878 (+)
G572476 NA other upstream 764475 8922335 ~ 8922794 (+)
G572315 NA other upstream 1036371 8649980 ~ 8650898 (+)
G570834 NA other upstream 1546507 8140282 ~ 8140762 (+)
G570875 NA other upstream 1601516 8084271 ~ 8085753 (+)
G573366 NA other downstream 440477 10128121 ~ 10132016 (+)
LOC110527289 LOC106590510 other downstream 491775 10173615 ~ 10233047 (+)
G574038 NA other downstream 1188463 10876107 ~ 10877184 (+)
G574122 NA other downstream 1315860 11003504 ~ 11076001 (+)

Expression


Co-expression Network