G572917


Basic Information

Item Value
gene id G572917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 9866307 ~ 9866539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU653201
tctgtctctgtctctctctctctctctctctctctctcacactctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctatctcctctctctctctctctgtctctgtttttatCACAGTTCCACCCTGACTTCtgttacctctgtctctctctgtctctctctctctctctctctctttctctctctctctctctcgctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU653201 True 233 lncRNA 0.48 1 9866307 9866539

Neighbor

gene id symbol gene type direction distance location
LOC110528748 acadl coding upstream 84678 9776039 ~ 9781629 (+)
LOC100135948 LOC100194643 coding upstream 96626 9763202 ~ 9769681 (+)
LOC110527090 LOC106575822 coding upstream 107323 9745341 ~ 9758984 (+)
LOC118965238 LOC106575811 coding upstream 196419 9664682 ~ 9669888 (+)
LOC110515808 LOC106575810 coding upstream 201682 9185275 ~ 9664625 (+)
LOC110497049 LOC106575743 coding downstream 13060 9879599 ~ 9980430 (+)
LOC110527289 LOC106590510 coding downstream 307076 10173615 ~ 10233047 (+)
LOC118965244 NA coding downstream 507379 10373918 ~ 10378145 (+)
LOC110527198 LOC106574751 coding downstream 514486 10381025 ~ 10410589 (+)
LOC110528725 LOC106574750 coding downstream 554645 10421184 ~ 10423568 (+)
G572851 NA non-coding upstream 146987 9719076 ~ 9719320 (+)
G572838 NA non-coding upstream 178663 9687269 ~ 9687644 (+)
G572833 NA non-coding upstream 187914 9676968 ~ 9678393 (+)
G572788 NA non-coding upstream 306006 9554962 ~ 9560301 (+)
G572773 NA non-coding upstream 349389 9516465 ~ 9516918 (+)
LOC118965239 LOC106575823 non-coding downstream 41 9783076 ~ 9876545 (+)
G572872 NA non-coding downstream 90509 9957048 ~ 9957419 (+)
G572948 NA non-coding downstream 114415 9980954 ~ 9981175 (+)
G572949 NA non-coding downstream 115074 9981613 ~ 9982021 (+)
G572868 NA non-coding downstream 117412 9983951 ~ 9984304 (+)
G572449 NA other upstream 932429 8930109 ~ 8933878 (+)
G572476 NA other upstream 943513 8922335 ~ 8922794 (+)
G572315 NA other upstream 1215409 8649980 ~ 8650898 (+)
G570834 NA other upstream 1725545 8140282 ~ 8140762 (+)
G570875 NA other upstream 1780554 8084271 ~ 8085753 (+)
G573366 NA other downstream 261582 10128121 ~ 10132016 (+)
G574038 NA other downstream 1009568 10876107 ~ 10877184 (+)
G574122 NA other downstream 1136965 11003504 ~ 11076001 (+)

Expression


Co-expression Network