G572872


Basic Information

Item Value
gene id G572872
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 9957048 ~ 9957419 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU653154
actcactcactcactcactcactcactcactcactctctatcactctctctctctcaattcaagtggctttattggtatgggaaacatatgttaacattgccaaagcaagtgaggtagataaatatttaaaagtgaaataaacaataaaatgaacagtaaacattacactcacagaagttccaaaacaataaagacattacaaatgtcatattatgtctatatacagtgttgtaacgatgtacaaatggttaaagtacaaaagggaaaataaataagcataaatatgggttgtatttaaaatggtgtttgttcttcactgcttGACCTtatcttgtggcaacaggtcacacgtcttgctgctgtgatggcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU653154 True 372 lncRNA 0.35 1 9957048 9957419

Neighbor

gene id symbol gene type direction distance location
LOC118965239 LOC106575823 coding upstream 80503 9783076 ~ 9876545 (+)
LOC110528748 acadl coding upstream 175419 9776039 ~ 9781629 (+)
LOC100135948 LOC100194643 coding upstream 187367 9763202 ~ 9769681 (+)
LOC110527090 LOC106575822 coding upstream 198064 9745341 ~ 9758984 (+)
LOC118965238 LOC106575811 coding upstream 287160 9664682 ~ 9669888 (+)
LOC110527289 LOC106590510 coding downstream 216196 10173615 ~ 10233047 (+)
LOC118965244 NA coding downstream 416499 10373918 ~ 10378145 (+)
LOC110527198 LOC106574751 coding downstream 423606 10381025 ~ 10410589 (+)
LOC110528725 LOC106574750 coding downstream 463765 10421184 ~ 10423568 (+)
LOC110527195 LOC106574795 coding downstream 470554 10427973 ~ 10462576 (+)
G572917 NA non-coding upstream 90509 9866307 ~ 9866539 (+)
G572851 NA non-coding upstream 237728 9719076 ~ 9719320 (+)
G572838 NA non-coding upstream 269404 9687269 ~ 9687644 (+)
G572833 NA non-coding upstream 278655 9676968 ~ 9678393 (+)
G572948 NA non-coding downstream 23535 9980954 ~ 9981175 (+)
G572949 NA non-coding downstream 24194 9981613 ~ 9982021 (+)
G572868 NA non-coding downstream 26532 9983951 ~ 9984304 (+)
G572871 NA non-coding downstream 26964 9984383 ~ 9986465 (+)
G572877 NA non-coding downstream 29109 9986528 ~ 9987182 (+)
G572449 NA other upstream 1023170 8930109 ~ 8933878 (+)
G572476 NA other upstream 1034254 8922335 ~ 8922794 (+)
G572315 NA other upstream 1306150 8649980 ~ 8650898 (+)
G570834 NA other upstream 1816286 8140282 ~ 8140762 (+)
G570875 NA other upstream 1871295 8084271 ~ 8085753 (+)
LOC110497049 LOC106575743 other downstream 9248 9879599 ~ 9980430 (+)
G573366 NA other downstream 170702 10128121 ~ 10132016 (+)
G574038 NA other downstream 918688 10876107 ~ 10877184 (+)
G574122 NA other downstream 1046085 11003504 ~ 11076001 (+)

Expression


Co-expression Network