G572877


Basic Information

Item Value
gene id G572877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 9986528 ~ 9987182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU653159
gccagtattggactgagtactgagatgcagccagtattggactgagtactgagatgcagccagtattggactgagtactgagactcagccagtattggactgagtactgagatgcagccagtattggactgagtactgagacacagccagtattggactgagtactgagaTGCAGCAAGTATTGGacctagtactgagatgcagccagtattggactgagtactgagacacagccagtattggactgagacgcagccagtattggactgagtactgaTACGTagccagtattggactgagtactgagacgcagccagtattggactgagtactgagacgcagccagtattggactgagtactgagacgcagccagtattggactgagatgcagccagtattggactgagtactgagacgcagccagtattggactgagtactgagatgcagccagtattggactgagtactgagaCACAGCCAGTAATGGACtgagtactgagatgcagccagtattggactgagtactgagatgcagccagtattggactgagtactgagacacagccagtattggactgagtactgagacacagccagtattggactgagtactgagatgcagccagtattggactgagtactgagatgcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU653159 True 655 lncRNA 0.49 1 9986528 9987182

Neighbor

gene id symbol gene type direction distance location
LOC110497049 LOC106575743 coding upstream 6098 9879599 ~ 9980430 (+)
LOC118965239 LOC106575823 coding upstream 109983 9783076 ~ 9876545 (+)
LOC110528748 acadl coding upstream 204899 9776039 ~ 9781629 (+)
LOC100135948 LOC100194643 coding upstream 216847 9763202 ~ 9769681 (+)
LOC110527090 LOC106575822 coding upstream 227544 9745341 ~ 9758984 (+)
LOC110527289 LOC106590510 coding downstream 186433 10173615 ~ 10233047 (+)
LOC118965244 NA coding downstream 386736 10373918 ~ 10378145 (+)
LOC110527198 LOC106574751 coding downstream 393843 10381025 ~ 10410589 (+)
LOC110528725 LOC106574750 coding downstream 434002 10421184 ~ 10423568 (+)
LOC110527195 LOC106574795 coding downstream 440791 10427973 ~ 10462576 (+)
G572871 NA non-coding upstream 63 9984383 ~ 9986465 (+)
G572868 NA non-coding upstream 2224 9983951 ~ 9984304 (+)
G572949 NA non-coding upstream 4507 9981613 ~ 9982021 (+)
G572948 NA non-coding upstream 5353 9980954 ~ 9981175 (+)
G572872 NA non-coding upstream 29109 9957048 ~ 9957419 (+)
G572956 LOC106595300 non-coding downstream 7641 9994823 ~ 9996160 (+)
G572960 NA non-coding downstream 12544 9999726 ~ 9999997 (+)
G572961 NA non-coding downstream 13347 10000529 ~ 10000771 (+)
G572875 NA non-coding downstream 14118 10001300 ~ 10005553 (+)
G572963 NA non-coding downstream 22669 10009851 ~ 10010850 (+)
G572449 NA other upstream 1052650 8930109 ~ 8933878 (+)
G572476 NA other upstream 1063734 8922335 ~ 8922794 (+)
G572315 NA other upstream 1335630 8649980 ~ 8650898 (+)
G570834 NA other upstream 1845766 8140282 ~ 8140762 (+)
G573366 NA other downstream 140939 10128121 ~ 10132016 (+)
G574038 NA other downstream 888925 10876107 ~ 10877184 (+)
G574122 NA other downstream 1016322 11003504 ~ 11076001 (+)
G574194 NA other downstream 1114363 11101545 ~ 11102286 (+)

Expression


Co-expression Network