G572963


Basic Information

Item Value
gene id G572963
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 10009851 ~ 10010850 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU653250
CAGAGAGTTTGCATTAGTTTAATGTGGTGCTTGTCAATGCTACCTCAAACATCATTTACATTTCTCAAGGAAAGCAAGGACCATACAGCCTCACCTTCCCAAAGACATTTTCAATATTGCACAATGTTTACAATTAGCTTCATTCATGGACAAATAATAGTTTTAAAGCATGTAAACAGCTGGAACTTCCCCAAAAAGTAGATGTCCGAGCAAGTGAACAACAAtgctatacccccccccccccccccctcaataaggcatgacatgcttgagactgaggagcaggatAATAAGGGAACAATTCCTGTTATGTCAGAATATAACTGATGTTTTGTTTTATCTGCATGAGATCTGGTTTGTCAGATTGTCGAACATTTACAGCAAGTGTTACTGCGACAGCCGATTTGAATGGTTCCAAAACTGTTGCAGTAGAAGTACATTATTCAACTGATTGTTCGAGTTGTCCTTCCCCAATGAGTCGTTTAAATTGCTCAAGGGAGGACATAGTATTTCAGACGTTAAGACCTGGTGATATTTTTCCTCAAGTACCATTATACTGTTCATCACGTGGCACAAACAATGAGATGTATAGGACAATCCTGATTATAACTggttggttcgagccctgaaagctgattggctgacagccgttgtATATCACggttatgacaaaacatgtatttttactgctctaattacattggtaacccgttaataataacaataaggcacctcgggggtttgtgatatatggccaacaaatagctcttagccgtggtatgttggccatataccacacctcctcgggccttattgcttaattaatgTTGTGCCACGTGTATTTCCACCCATCTGATGTACTTGACATATACCTATGGAGACATGCACACGTAAAAATAAACATCACCTTACACATTAACATCAGAGTTTGGattgggggacaggagggagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU653250 True 952 lncRNA 0.41 2 10009851 10010850

Neighbor

gene id symbol gene type direction distance location
LOC110497049 LOC106575743 coding upstream 29421 9879599 ~ 9980430 (+)
LOC118965239 LOC106575823 coding upstream 133306 9783076 ~ 9876545 (+)
LOC110528748 acadl coding upstream 228222 9776039 ~ 9781629 (+)
LOC100135948 LOC100194643 coding upstream 240170 9763202 ~ 9769681 (+)
LOC110527090 LOC106575822 coding upstream 250867 9745341 ~ 9758984 (+)
LOC110527289 LOC106590510 coding downstream 162765 10173615 ~ 10233047 (+)
LOC118965244 NA coding downstream 363068 10373918 ~ 10378145 (+)
LOC110527198 LOC106574751 coding downstream 370175 10381025 ~ 10410589 (+)
LOC110528725 LOC106574750 coding downstream 410334 10421184 ~ 10423568 (+)
LOC110527195 LOC106574795 coding downstream 417123 10427973 ~ 10462576 (+)
G572875 NA non-coding upstream 4298 10001300 ~ 10005553 (+)
G572961 NA non-coding upstream 9080 10000529 ~ 10000771 (+)
G572960 NA non-coding upstream 9854 9999726 ~ 9999997 (+)
G572956 LOC106595300 non-coding upstream 13691 9994823 ~ 9996160 (+)
G572877 NA non-coding upstream 22669 9986528 ~ 9987182 (+)
G572964 LOC106574783 non-coding downstream 338 10011188 ~ 10012739 (+)
G572969 NA non-coding downstream 9490 10020340 ~ 10022177 (+)
G572986 LOC106574782 non-coding downstream 54719 10065569 ~ 10066182 (+)
G573363 NA non-coding downstream 114998 10125848 ~ 10126084 (+)
G573364 NA non-coding downstream 116184 10127034 ~ 10145510 (+)
G572449 NA other upstream 1075973 8930109 ~ 8933878 (+)
G572476 NA other upstream 1087057 8922335 ~ 8922794 (+)
G572315 NA other upstream 1358953 8649980 ~ 8650898 (+)
G570834 NA other upstream 1869089 8140282 ~ 8140762 (+)
G573366 NA other downstream 117271 10128121 ~ 10132016 (+)
G574038 NA other downstream 865257 10876107 ~ 10877184 (+)
G574122 NA other downstream 992654 11003504 ~ 11076001 (+)
G574194 NA other downstream 1090695 11101545 ~ 11102286 (+)

Expression


Co-expression Network