Gene
RNA
| Item | Value |
|---|---|
| gene id | G573737 |
| gene name | LOC106584613 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 10339219 ~ 10342437 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU654182 | False | 907 | lncRNA | 0.43 | 1 | 10339219 | 10340125 |
| TU654188 | False | 336 | lncRNA | 0.38 | 1 | 10339219 | 10339554 |
| TU654179 | False | 2527 | lncRNA | 0.42 | 1 | 10339255 | 10341781 |
| TU654185 | False | 300 | lncRNA | 0.40 | 1 | 10339255 | 10339554 |
| TU654187 | False | 871 | lncRNA | 0.44 | 1 | 10339255 | 10340125 |
| TU654180 | False | 1998 | lncRNA | 0.43 | 1 | 10340271 | 10342268 |
| TU654183 | False | 2167 | lncRNA | 0.43 | 1 | 10340271 | 10342437 |
| TU654184 | True | 581 | lncRNA | 0.39 | 1 | 10340271 | 10340851 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965242 | LOC106574692 | coding | downstream | 13635 | 10259338 ~ 10325584 (-) |
| LOC118965243 | NA | coding | downstream | 41200 | 10296624 ~ 10298019 (-) |
| LOC118965241 | ackr3 | coding | downstream | 164991 | 10166025 ~ 10174228 (-) |
| LOC110516772 | LOC100505417 | coding | downstream | 252300 | 10085183 ~ 10086919 (-) |
| LOC110513724 | LOC106574782 | coding | downstream | 259620 | 10055240 ~ 10079599 (-) |
| si:dkey-222p3.1 | NA | coding | upstream | 30006 | 10372443 ~ 10375376 (-) |
| LOC110527191 | NA | coding | upstream | 238459 | 10580896 ~ 10588969 (-) |
| LOC110527192 | LOC106574768 | coding | upstream | 274616 | 10617053 ~ 10641319 (-) |
| LOC110527088 | NA | coding | upstream | 310041 | 10652478 ~ 10654005 (-) |
| LOC110527190 | NA | coding | upstream | 315506 | 10657821 ~ 10679853 (-) |
| G573736 | NA | non-coding | downstream | 357 | 10338490 ~ 10338862 (-) |
| G573729 | NA | non-coding | downstream | 7014 | 10331895 ~ 10332205 (-) |
| G573698 | NA | non-coding | downstream | 83281 | 10255049 ~ 10255938 (-) |
| G573697 | NA | non-coding | downstream | 84685 | 10254180 ~ 10254534 (-) |
| G573738 | pol3 | non-coding | upstream | 2045 | 10344482 ~ 10344885 (-) |
| G573739 | NA | non-coding | upstream | 2820 | 10345257 ~ 10345596 (-) |
| G573742 | NA | non-coding | upstream | 6839 | 10349276 ~ 10349603 (-) |
| G573746 | NA | non-coding | upstream | 14200 | 10356637 ~ 10356921 (-) |
| G573749 | NA | non-coding | upstream | 19368 | 10361805 ~ 10362101 (-) |
| G573253 | NA | other | downstream | 461859 | 9875105 ~ 9877360 (-) |
| G573179 | NA | other | downstream | 644376 | 9694426 ~ 9694843 (-) |
| LOC110512355 | LOC106575834 | other | downstream | 1428682 | 8902833 ~ 8910580 (-) |
| LOC110527271 | LOC106575866 | other | downstream | 1721308 | 8616126 ~ 8621907 (-) |
| G573743 | NA | other | upstream | 7272 | 10349709 ~ 10350718 (-) |
| G573769 | NA | other | upstream | 65704 | 10408141 ~ 10456035 (-) |
| G573892 | NA | other | upstream | 337518 | 10679955 ~ 10681763 (-) |
| G574619 | NA | other | upstream | 864901 | 11207338 ~ 11207793 (-) |
| LOC110528724 | LOC106575641 | other | upstream | 1330320 | 11655683 ~ 11730452 (-) |
