Gene
RNA
| Item | Value |
|---|---|
| gene id | G573739 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 10345257 ~ 10345596 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: retrovirus-related Pol polyprotein from transposon 17.6 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU654190 | True | 340 | lncRNA | 0.39 | 1 | 10345257 | 10345596 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965242 | LOC106574692 | coding | downstream | 19673 | 10259338 ~ 10325584 (-) |
| LOC118965243 | NA | coding | downstream | 47238 | 10296624 ~ 10298019 (-) |
| LOC118965241 | ackr3 | coding | downstream | 171029 | 10166025 ~ 10174228 (-) |
| LOC110516772 | LOC100505417 | coding | downstream | 258338 | 10085183 ~ 10086919 (-) |
| LOC110513724 | LOC106574782 | coding | downstream | 265658 | 10055240 ~ 10079599 (-) |
| si:dkey-222p3.1 | NA | coding | upstream | 26847 | 10372443 ~ 10375376 (-) |
| LOC110527191 | NA | coding | upstream | 235300 | 10580896 ~ 10588969 (-) |
| LOC110527192 | LOC106574768 | coding | upstream | 271457 | 10617053 ~ 10641319 (-) |
| LOC110527088 | NA | coding | upstream | 306882 | 10652478 ~ 10654005 (-) |
| LOC110527190 | NA | coding | upstream | 312347 | 10657821 ~ 10679853 (-) |
| G573738 | pol3 | non-coding | downstream | 372 | 10344482 ~ 10344885 (-) |
| G573737 | LOC106584613 | non-coding | downstream | 2820 | 10339219 ~ 10342437 (-) |
| G573736 | NA | non-coding | downstream | 6395 | 10338490 ~ 10338862 (-) |
| G573729 | NA | non-coding | downstream | 13052 | 10331895 ~ 10332205 (-) |
| G573742 | NA | non-coding | upstream | 3680 | 10349276 ~ 10349603 (-) |
| G573746 | NA | non-coding | upstream | 11041 | 10356637 ~ 10356921 (-) |
| G573749 | NA | non-coding | upstream | 16209 | 10361805 ~ 10362101 (-) |
| G573750 | NA | non-coding | upstream | 16574 | 10362170 ~ 10362464 (-) |
| G573751 | NA | non-coding | upstream | 19651 | 10365247 ~ 10367297 (-) |
| G573253 | NA | other | downstream | 467897 | 9875105 ~ 9877360 (-) |
| G573179 | NA | other | downstream | 650414 | 9694426 ~ 9694843 (-) |
| LOC110512355 | LOC106575834 | other | downstream | 1434720 | 8902833 ~ 8910580 (-) |
| LOC110527271 | LOC106575866 | other | downstream | 1727346 | 8616126 ~ 8621907 (-) |
| G573743 | NA | other | upstream | 4113 | 10349709 ~ 10350718 (-) |
| G573769 | NA | other | upstream | 62545 | 10408141 ~ 10456035 (-) |
| G573892 | NA | other | upstream | 334359 | 10679955 ~ 10681763 (-) |
| G574619 | NA | other | upstream | 861742 | 11207338 ~ 11207793 (-) |
| LOC110528724 | LOC106575641 | other | upstream | 1327161 | 11655683 ~ 11730452 (-) |
