G573749



Basic Information


Item Value
gene id G573749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 10361805 ~ 10362101 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU654212
tctacagacaatggaattctccggttggaacgttattgaagatgtatcataaaaacatcctaaagattgattctatacttagtttgacaagtttcttcaacCTGTAATATCAccttttgaacttttcgtccaacgttcggctggacctgcatgAGACTTTGGATTTATGTACTaaacacgctaacaaaagtagctacttggacattatcgaacaaaacaaacatttattgtggaactaggattcctgggagtgcattctgatgaagatcatcaaaggtaagggaatatttataatgt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU654212 True 297 lncRNA 0.36 1 10361805 10362101

Neighbor


gene id symbol gene type direction distance location
LOC118965242 LOC106574692 coding downstream 36221 10259338 ~ 10325584 (-)
LOC118965243 NA coding downstream 63786 10296624 ~ 10298019 (-)
LOC118965241 ackr3 coding downstream 187577 10166025 ~ 10174228 (-)
LOC110516772 LOC100505417 coding downstream 274886 10085183 ~ 10086919 (-)
LOC110513724 LOC106574782 coding downstream 282206 10055240 ~ 10079599 (-)
si:dkey-222p3.1 NA coding upstream 10342 10372443 ~ 10375376 (-)
LOC110527191 NA coding upstream 218795 10580896 ~ 10588969 (-)
LOC110527192 LOC106574768 coding upstream 254952 10617053 ~ 10641319 (-)
LOC110527088 NA coding upstream 290377 10652478 ~ 10654005 (-)
LOC110527190 NA coding upstream 295842 10657821 ~ 10679853 (-)
G573746 NA non-coding downstream 4884 10356637 ~ 10356921 (-)
G573742 NA non-coding downstream 12202 10349276 ~ 10349603 (-)
G573739 NA non-coding downstream 16209 10345257 ~ 10345596 (-)
G573738 pol3 non-coding downstream 16920 10344482 ~ 10344885 (-)
G573737 LOC106584613 non-coding downstream 19368 10339219 ~ 10342437 (-)
G573750 NA non-coding upstream 69 10362170 ~ 10362464 (-)
G573751 NA non-coding upstream 3146 10365247 ~ 10367297 (-)
G573757 LOC106574751 non-coding upstream 28857 10390958 ~ 10391345 (-)
G573780 NA non-coding upstream 65018 10427119 ~ 10428275 (-)
G573789 NA non-coding upstream 77829 10439930 ~ 10442003 (-)
G573743 NA other downstream 11087 10349709 ~ 10350718 (-)
G573253 NA other downstream 484445 9875105 ~ 9877360 (-)
G573179 NA other downstream 666962 9694426 ~ 9694843 (-)
LOC110512355 LOC106575834 other downstream 1451268 8902833 ~ 8910580 (-)
G573769 NA other upstream 46040 10408141 ~ 10456035 (-)
G573892 NA other upstream 317854 10679955 ~ 10681763 (-)
G574619 NA other upstream 845237 11207338 ~ 11207793 (-)
LOC110528724 LOC106575641 other upstream 1310656 11655683 ~ 11730452 (-)
LOC110515532 NA other upstream 1478821 11840744 ~ 11844731 (-)

Expression


G573749 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G573749 Expression in each Bioproject

Bar chart with 17 bars.
G573749 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network