G573473


Basic Information

Item Value
gene id G573473
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 10367310 ~ 10368406 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU653873
ATTTAAAGTAACTAGTGAAACCTTTTAAGTCCATTCATTAAAGTTgcaagagatttgagtctgtatgttggcagcagcctctctatgttagtgatggctgtttaacattctgatggccttgagatagaaggtgtttttcagtctctcggtcccagttttgatgaacctgtactgacctcaacttctggatgataacggggtgaacaggcagtggctcgggtggttgtccttgttggtaatcaagcctaccacactagtgtcatctgcaaacttgataattgagttagaggcgtgcatggccacgcagtcatgggtgaacagggagtacaggagagggctgagaacgcacccttgtggggccccagtgttgaggatcagcggagtggagatgttgtttcctaccctcaccacctgggggcggcccatcagaaagtccaggacccatttGCACAGGGccgggtcgagacccagggtctcaagctcaatgacgagtttggagggtactatggtgttaaatgctgagctgtagtcaatgaacagcattcttacataggtattcctcttgtccagatgggatagggcagtgtgatggtgattgcgtcgtctgtggacctattggggcggtaagcaaattggagtgggtctagggtatcaggtaggttggaggtgatatgatccttcactagtctctcaaagcacttcatgatgacagaagtgagtgctatagggcagtagtcatttagttcagttaccttagctttcttgggaacaggaacaatggtggccatcttgaagcatgtgggcacagcagactgggatagggattgattgaatatgtccgtaaacacaccagccagctggtctgcacatgctctgaggacgcggctagggatgccatctgggccggcagccttgcgagggttaacacttttaaatgttttattcacattggccacggtgaaggagagcccgcaggttttggtagcgggccgtgtcagtggcactgtattttcctcaaagtgagcaaagaagttgtttaatttgtctgggagcaagacgttgaTGTCCGCGATGgggatggttttctttttgtaatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU653873 True 1097 lncRNA 0.49 1 10367310 10368406

Neighbor

gene id symbol gene type direction distance location
LOC110527289 LOC106590510 coding upstream 134263 10173615 ~ 10233047 (+)
LOC110497049 LOC106575743 coding upstream 386880 9879599 ~ 9980430 (+)
LOC118965239 LOC106575823 coding upstream 490765 9783076 ~ 9876545 (+)
LOC110528748 acadl coding upstream 585681 9776039 ~ 9781629 (+)
LOC100135948 LOC100194643 coding upstream 597629 9763202 ~ 9769681 (+)
LOC118965244 NA coding downstream 5512 10373918 ~ 10378145 (+)
LOC110527198 LOC106574751 coding downstream 12619 10381025 ~ 10410589 (+)
LOC110528725 LOC106574750 coding downstream 52778 10421184 ~ 10423568 (+)
LOC110527195 LOC106574795 coding downstream 59567 10427973 ~ 10462576 (+)
LOC110527193 LOC106574775 coding downstream 128151 10496557 ~ 10531876 (+)
G573472 NA non-coding upstream 10479 10356547 ~ 10356831 (+)
G573470 NA non-coding upstream 28448 10338297 ~ 10338862 (+)
G573469 NA non-coding upstream 29202 10337764 ~ 10338108 (+)
G573468 NA non-coding upstream 29673 10337431 ~ 10337637 (+)
G573467 NA non-coding upstream 30110 10336829 ~ 10337200 (+)
G573474 NA non-coding downstream 68 10368474 ~ 10369305 (+)
G573475 NA non-coding downstream 1146 10369552 ~ 10370323 (+)
G573555 NA non-coding downstream 191858 10560264 ~ 10564014 (+)
G573570 LOC106574768 non-coding downstream 215865 10584271 ~ 10624620 (+)
G573593 NA non-coding downstream 245122 10613528 ~ 10617550 (+)
G573366 NA other upstream 235294 10128121 ~ 10132016 (+)
G572449 NA other upstream 1433432 8930109 ~ 8933878 (+)
G572476 NA other upstream 1444516 8922335 ~ 8922794 (+)
G574038 NA other downstream 507701 10876107 ~ 10877184 (+)
G574122 NA other downstream 635098 11003504 ~ 11076001 (+)
G574194 NA other downstream 733139 11101545 ~ 11102286 (+)
G574244 NA other downstream 810390 11178796 ~ 11197247 (+)
G574284 NA other downstream 881693 11250099 ~ 11250780 (+)

Expression


Co-expression Network