G573475


Basic Information

Item Value
gene id G573475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 10369552 ~ 10370323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU653875
ggaggtccgaacaaaggatccgcttcgggaaagtcgtattcctggtcgtaatgatgatAAGTTGACGTCGCTTTTATATCCAAtggttcttcccggctgtatctaataacacttgagattttcagagctaacaatgtaagaaataatacataaaaaaataaattactgcatagtttcctaaggacctgaagcgaggtgaccatctctgtcggcgccatctatttttttgtagttttttttGCATCAATTGTCCAAAAACTATGGCTAAATCATTGTGCATGACTTACTCTACACAGGAAACACATCTTATTGTATTCTGGTTAAAGACAACTTTGTTAGGACAGGGTAATAGTTCCCGTGAAACCATTCAGTATGATGTGTATTGCAACAGACCACCTTCTGCCAGACAAACTATTGCACAAGCATCACATAAACAACTACTGTTAGGAAACTGTAAACAATCACCATTTACATGGTGATATTTTTgcgtgttgtggtgtgtggtatTTTCCACTGTGCAAGAGCTTTCTCGTAACTAAAAGGCTCTACTTCAACTGATTGGGCCATGAGTCATACAAGTATTTTGTTCCTGTGATCCTTACTGCAATTTCATTGGCCATTTGCACAGAAGTCACAGATTTAGAACAAAAAGGAAGTTAAGCAGCTGATTACTGTAATCATTACATTTTACTAGAAGATATTTACACTAATGGATTGACCATTCATGTATCCAATAACTCACTAGGACTACATCATACATGCATTTTAGTAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU653875 True 772 lncRNA 0.37 1 10369552 10370323

Neighbor

gene id symbol gene type direction distance location
LOC110527289 LOC106590510 coding upstream 136505 10173615 ~ 10233047 (+)
LOC110497049 LOC106575743 coding upstream 389122 9879599 ~ 9980430 (+)
LOC118965239 LOC106575823 coding upstream 493007 9783076 ~ 9876545 (+)
LOC110528748 acadl coding upstream 587923 9776039 ~ 9781629 (+)
LOC100135948 LOC100194643 coding upstream 599871 9763202 ~ 9769681 (+)
LOC118965244 NA coding downstream 3595 10373918 ~ 10378145 (+)
LOC110527198 LOC106574751 coding downstream 10702 10381025 ~ 10410589 (+)
LOC110528725 LOC106574750 coding downstream 50861 10421184 ~ 10423568 (+)
LOC110527195 LOC106574795 coding downstream 57650 10427973 ~ 10462576 (+)
LOC110527193 LOC106574775 coding downstream 126234 10496557 ~ 10531876 (+)
G573474 NA non-coding upstream 247 10368474 ~ 10369305 (+)
G573473 NA non-coding upstream 1146 10367310 ~ 10368406 (+)
G573472 NA non-coding upstream 12721 10356547 ~ 10356831 (+)
G573470 NA non-coding upstream 30690 10338297 ~ 10338862 (+)
G573469 NA non-coding upstream 31444 10337764 ~ 10338108 (+)
G573555 NA non-coding downstream 189941 10560264 ~ 10564014 (+)
G573570 LOC106574768 non-coding downstream 213948 10584271 ~ 10624620 (+)
G573593 NA non-coding downstream 243205 10613528 ~ 10617550 (+)
G573571 NA non-coding downstream 256356 10626679 ~ 10671057 (+)
G573610 LOC106583873 non-coding downstream 271800 10642123 ~ 10645591 (+)
G573366 NA other upstream 237536 10128121 ~ 10132016 (+)
G572449 NA other upstream 1435674 8930109 ~ 8933878 (+)
G572476 NA other upstream 1446758 8922335 ~ 8922794 (+)
G574038 NA other downstream 505784 10876107 ~ 10877184 (+)
G574122 NA other downstream 633181 11003504 ~ 11076001 (+)
G574194 NA other downstream 731222 11101545 ~ 11102286 (+)
G574244 NA other downstream 808473 11178796 ~ 11197247 (+)
G574284 NA other downstream 879776 11250099 ~ 11250780 (+)

Expression


Co-expression Network