G573651


Basic Information

Item Value
gene id G573651
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 10717326 ~ 10718266 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU654084
acagtagtagaggtgttatcactatgtacagtagtagaggtgttatcaccatgtacagtagtagaggtgttatcactctggacagtagtagaggtgttatcactctggacagtaatagaggtgttatcactctggacagtagtagaggtgttatcactatgGACAGgagtagaggtgttatcactatggacagtagtagaggtgttatcactatggacagtagtagaggtgttatcactatggacagtagtagaggtgttatcactatgaacagcagtagaggtgttatcactatgaacagtagtagag
>TU654085
acagtagtagaggtgttatcactatgtacagtagtagaggtgttatcaccatgtacagtagtagaggtgttatcactctggacagtagtagaggtgttatcactctggacagtaatagaggtgttatcactatgaacagtaatagaggtgttatcactatgaacagtagtagaggtgttatcactatgaacagtagtagaggtgttatcactatgaacagtagtagaggtgttatcact

Function

NR:

description
PREDICTED: uncharacterized protein LOC106572272

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU654084 False 309 lncRNA 0.41 2 10717326 10717931
TU654085 True 239 lncRNA 0.38 2 10717326 10718266

Neighbor

gene id symbol gene type direction distance location
LOC110527193 LOC106574775 coding upstream 185450 10496557 ~ 10531876 (+)
LOC110527195 LOC106574795 coding upstream 254750 10427973 ~ 10462576 (+)
LOC110528725 LOC106574750 coding upstream 293758 10421184 ~ 10423568 (+)
LOC110527198 LOC106574751 coding upstream 306737 10381025 ~ 10410589 (+)
LOC118965244 NA coding upstream 339181 10373918 ~ 10378145 (+)
LOC110527185 LOC106574771 coding downstream 87686 10805952 ~ 10894671 (+)
LOC110527184 LOC106575653 coding downstream 181889 10900155 ~ 10905709 (+)
LOC110495463 LOC106575569 coding downstream 298012 11016278 ~ 11430108 (+)
LOC118965246 LOC106574739 coding downstream 778287 11496553 ~ 11498867 (+)
LOC110528830 LOC106575616 coding downstream 818640 11536906 ~ 11628121 (+)
G573650 NA non-coding upstream 207 10716716 ~ 10717119 (+)
G573636 NA non-coding upstream 26934 10690138 ~ 10690392 (+)
G573630 NA non-coding upstream 35189 10681815 ~ 10682137 (+)
G573620 NA non-coding upstream 36407 10679006 ~ 10680919 (+)
G573571 NA non-coding upstream 46269 10626679 ~ 10671057 (+)
G574038 NA non-coding downstream 158501 10876107 ~ 10877184 (+)
G574049 NA non-coding downstream 188928 10907194 ~ 10907414 (+)
G574053 NA non-coding downstream 196928 10915194 ~ 10915592 (+)
G574056 NA non-coding downstream 199695 10917961 ~ 10918353 (+)
LOC110527289 LOC106590510 other upstream 537491 10173615 ~ 10233047 (+)
G573366 NA other upstream 585310 10128121 ~ 10132016 (+)
LOC110497049 LOC106575743 other upstream 742198 9879599 ~ 9980430 (+)
G572449 NA other upstream 1783448 8930109 ~ 8933878 (+)
G572476 NA other upstream 1794532 8922335 ~ 8922794 (+)
G574122 NA other downstream 285238 11003504 ~ 11076001 (+)
G574194 NA other downstream 383279 11101545 ~ 11102286 (+)
G574244 NA other downstream 460530 11178796 ~ 11197247 (+)
G574284 NA other downstream 531833 11250099 ~ 11250780 (+)

Expression


Co-expression Network