G574053


Basic Information

Item Value
gene id G574053
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 10915194 ~ 10915592 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU654548
agtagtttatgtgtcggggggctagggtcagtttgttatatctggagtacttctcctgtcctatttggtgtcctgtgtgaatctaagtgtgcgttctctaattctctccttctctctttctctctctcggaggacctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggctgtgctgctgctccagttttaactgttctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccatcccacatatgctctctctaattctctctttctttctctctctcggaggacctgagccctagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU654548 True 399 lncRNA 0.49 1 10915194 10915592

Neighbor

gene id symbol gene type direction distance location
LOC110527184 LOC106575653 coding upstream 9485 10900155 ~ 10905709 (+)
LOC110527185 LOC106574771 coding upstream 20526 10805952 ~ 10894671 (+)
LOC110527193 LOC106574775 coding upstream 383318 10496557 ~ 10531876 (+)
LOC110527195 LOC106574795 coding upstream 452618 10427973 ~ 10462576 (+)
LOC110528725 LOC106574750 coding upstream 491626 10421184 ~ 10423568 (+)
LOC110495463 LOC106575569 coding downstream 100686 11016278 ~ 11430108 (+)
LOC118965246 LOC106574739 coding downstream 580961 11496553 ~ 11498867 (+)
LOC110528830 LOC106575616 coding downstream 621314 11536906 ~ 11628121 (+)
LOC110495474 LOC106573985 coding downstream 828362 11743954 ~ 11750311 (+)
LOC110495473 LOC106575640 coding downstream 841139 11756731 ~ 11764384 (+)
G574049 NA non-coding upstream 7780 10907194 ~ 10907414 (+)
G574038 NA non-coding upstream 38010 10876107 ~ 10877184 (+)
G573651 NA non-coding upstream 196928 10717326 ~ 10718266 (+)
G573650 NA non-coding upstream 198075 10716716 ~ 10717119 (+)
G574056 NA non-coding downstream 2369 10917961 ~ 10918353 (+)
G574064 NA non-coding downstream 10348 10925940 ~ 10926143 (+)
G574079 NA non-coding downstream 24701 10940293 ~ 10940679 (+)
G574097 NA non-coding downstream 48327 10963919 ~ 10964800 (+)
G574177 NA non-coding downstream 170450 11086042 ~ 11086317 (+)
LOC110527289 LOC106590510 other upstream 735359 10173615 ~ 10233047 (+)
G573366 NA other upstream 783178 10128121 ~ 10132016 (+)
LOC110497049 LOC106575743 other upstream 940066 9879599 ~ 9980430 (+)
G572449 NA other upstream 1981316 8930109 ~ 8933878 (+)
G574122 NA other downstream 87912 11003504 ~ 11076001 (+)
G574194 NA other downstream 185953 11101545 ~ 11102286 (+)
G574244 NA other downstream 263204 11178796 ~ 11197247 (+)
G574284 NA other downstream 334507 11250099 ~ 11250780 (+)
G574348 NA other downstream 433757 11349349 ~ 11349853 (+)

Expression


Co-expression Network