XLOC_025138 (si:ch73-106n3.2)


Basic Information

Item Value
gene id XLOC_025138
gene name si:ch73-106n3.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 13569806 ~ 13576052 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049667
GTGTATGCTCAACCCCGCAAACGAACACAACGAATTCAAAACACCACTGAAGATGAAGACTATATTAATCCAGATGATGATGGAAATCCCATTATGGACCACACTGACACTGAGTCGTATGAAATAATGTCTGGGTCAGACTGTATATACAACAATTCAGGCTTCACAGCAGTCCATGATTTAGAGGATGGAGATTCATATGAAGTGATGGACGAAGTCCCGATCTagaaagagatggatggatgaggaGAACAGAGGGAATGAGAGACATGTGGAGAAACAGACAACTGGAAAACTGAAAGAGTCGGACAAAACCAACCTGAATTCTAAATGAACTATTTAGACATACAAATCTTATATT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103509

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049667 True 361 mRNA 0.40 4 13569806 13576052

Neighbor

gene id symbol gene type direction distance location
XLOC_025137 si:ch73-106n3.1 coding upstream 2044 13559199 ~ 13567762 (+)
XLOC_025136 JMJD8 coding upstream 48691 13511984 ~ 13521115 (+)
XLOC_025135 CABZ01079251.1 coding upstream 79861 13482542 ~ 13489945 (+)
XLOC_025134 NA coding upstream 91933 13476872 ~ 13477873 (+)
XLOC_025133 zgc:77748 coding upstream 96609 13469704 ~ 13473197 (+)
XLOC_025139 hspbp1 coding downstream 24662 13600714 ~ 13618382 (+)
XLOC_025140 pglyrp6 coding downstream 48763 13624815 ~ 13633331 (+)
XLOC_025141 si:ch211-194b1.1 coding downstream 61331 13637383 ~ 13684397 (+)
XLOC_025142 ptger1b coding downstream 254547 13830599 ~ 13837063 (+)
XLOC_025143 ilf3b coding downstream 266502 13842554 ~ 13901074 (+)
XLOC_025429 BX649540.1 misc downstream 16672687 30248739 ~ 30249036 (+)
XLOC_025131 dre-mir-27c non-coding upstream 156593 13406451 ~ 13413213 (+)
XLOC_025130 dre-mir-23a-2 non-coding upstream 163483 13406226 ~ 13406323 (+)
XLOC_025129 NA non-coding upstream 163724 13389862 ~ 13406082 (+)
XLOC_025128 NA non-coding upstream 202298 13360703 ~ 13367508 (+)
XLOC_025145 NA non-coding downstream 452191 14028243 ~ 14073770 (+)
XLOC_025147 NA non-coding downstream 624991 14201043 ~ 14202519 (+)
XLOC_025148 AL954138.2 non-coding downstream 666067 14242119 ~ 14248538 (+)
XLOC_025149 NA non-coding downstream 675192 14251244 ~ 14254765 (+)
XLOC_025151 NA non-coding downstream 701598 14277650 ~ 14287841 (+)

Expression


Co-expression Network