G574387


Basic Information

Item Value
gene id G574387
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 11425309 ~ 11425706 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU654921
GATAGGTCAATGTATTGtctgatgtcagtgtgtttaacaagGCTATGGGGTCTGATAGGTCAATGTATTGtctgatgtcagtgtgtttaacaagGCTATGGGTCTGATAGGTCAATGTATTGtctgatgtcagtgtgtttaacaagGCTATGGGTCTGATAGGTCAATGTATTGTCTGATGtcagtgtgttttgtgtttgttgacttctcattctctctgtttttctcaatatagattttttttaatgtaaaatgCATGCTCTATATCATGTTATGATGCATTAGATGTATACACTTCTATTTAAATATCCTATTTAGCTAGTCAAACTCAATAAAAGACCATAGCAGGCAGCATCAACCAGTGGATGATAGACCATGTTTTACATACTATACACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU654921 True 398 lncRNA 0.35 1 11425309 11425706

Neighbor

gene id symbol gene type direction distance location
LOC110527184 LOC106575653 coding upstream 519600 10900155 ~ 10905709 (+)
LOC110527185 LOC106574771 coding upstream 530641 10805952 ~ 10894671 (+)
LOC110527193 LOC106574775 coding upstream 893433 10496557 ~ 10531876 (+)
LOC110527195 LOC106574795 coding upstream 962733 10427973 ~ 10462576 (+)
LOC110528725 LOC106574750 coding upstream 1001741 10421184 ~ 10423568 (+)
LOC118965246 LOC106574739 coding downstream 70847 11496553 ~ 11498867 (+)
LOC110528830 LOC106575616 coding downstream 111200 11536906 ~ 11628121 (+)
LOC110495474 LOC106573985 coding downstream 318248 11743954 ~ 11750311 (+)
LOC110495473 LOC106575640 coding downstream 331025 11756731 ~ 11764384 (+)
LOC118965247 LOC106575639 coding downstream 348756 11774462 ~ 11776663 (+)
G574376 NA non-coding upstream 28754 11396297 ~ 11396555 (+)
G574374 NA non-coding upstream 32834 11392214 ~ 11392475 (+)
G574373 NA non-coding upstream 33599 11391429 ~ 11391710 (+)
G574372 NA non-coding upstream 34144 11390946 ~ 11391165 (+)
G574371 NA non-coding upstream 36976 11387952 ~ 11388333 (+)
LOC110495463 LOC106575569 non-coding downstream 1450 11016278 ~ 11430108 (+)
G574726 NA non-coding downstream 8018 11433724 ~ 11434837 (+)
G574788 NA non-coding downstream 153444 11579150 ~ 11583219 (+)
G574790 NA non-coding downstream 158694 11584400 ~ 11584603 (+)
G574791 NA non-coding downstream 159166 11584872 ~ 11585661 (+)
G574348 NA other upstream 75456 11349349 ~ 11349853 (+)
G574284 NA other upstream 174529 11250099 ~ 11250780 (+)
G574244 NA other upstream 228062 11178796 ~ 11197247 (+)
G574194 NA other upstream 323023 11101545 ~ 11102286 (+)
G574122 NA other upstream 349308 11003504 ~ 11076001 (+)
G574754 NA other downstream 59547 11485253 ~ 11488504 (+)
LOC110497002 il8r other downstream 404278 11826502 ~ 11836170 (+)
LOC110528829 LOC106574706 other downstream 1038546 12400616 ~ 12474139 (+)

Expression


Co-expression Network