G574792


Basic Information

Item Value
gene id G574792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 11615274 ~ 11616572 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU655387
aaggaggttagtggtgtttgagcctgttgtcgggaccgtcctgttccacatggtaaaggaggttagtggtgtttgagcctgttgtcgggaccggcctgttccacatggtaaaggaggttagtggtgtttgagcctgttggagggaccgtcctgttccacatggtaaaggaggctagtggtgtttgagcctgttgtcgggaccggcctgttccacatggtaaaggaggttagtggtgtttgagcctgttgtcgggaccgtcctgtttcacatggtaaaggaggttagtggtgtttgagcctgttggaggg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU655387 True 309 lncRNA 0.53 2 11615274 11616572

Neighbor

gene id symbol gene type direction distance location
LOC118965246 LOC106574739 coding upstream 116407 11496553 ~ 11498867 (+)
LOC110495463 LOC106575569 coding upstream 185166 11016278 ~ 11430108 (+)
LOC110527184 LOC106575653 coding upstream 709565 10900155 ~ 10905709 (+)
LOC110527185 LOC106574771 coding upstream 720606 10805952 ~ 10894671 (+)
LOC110527193 LOC106574775 coding upstream 1083398 10496557 ~ 10531876 (+)
LOC110495474 LOC106573985 coding downstream 127382 11743954 ~ 11750311 (+)
LOC110495473 LOC106575640 coding downstream 140159 11756731 ~ 11764384 (+)
LOC118965247 LOC106575639 coding downstream 157890 11774462 ~ 11776663 (+)
LOC110497002 il8r coding downstream 209930 11826502 ~ 11836170 (+)
LOC110528828 tns1 coding downstream 244596 11861168 ~ 12118392 (+)
G574791 NA non-coding upstream 29613 11584872 ~ 11585661 (+)
G574790 NA non-coding upstream 30671 11584400 ~ 11584603 (+)
G574788 NA non-coding upstream 32055 11579150 ~ 11583219 (+)
G574726 NA non-coding upstream 180437 11433724 ~ 11434837 (+)
G574809 NA non-coding downstream 31623 11648195 ~ 11648469 (+)
G574812 NA non-coding downstream 35447 11652019 ~ 11676476 (+)
G574834 NA non-coding downstream 78705 11695277 ~ 11697631 (+)
G574853 NA non-coding downstream 112049 11728621 ~ 11728988 (+)
G575015 NA non-coding downstream 123982 11740554 ~ 11740815 (+)
G574754 NA other upstream 126770 11485253 ~ 11488504 (+)
G574348 NA other upstream 265421 11349349 ~ 11349853 (+)
G574284 NA other upstream 364494 11250099 ~ 11250780 (+)
G574244 NA other upstream 418027 11178796 ~ 11197247 (+)
LOC110528829 LOC106574706 other downstream 847680 12400616 ~ 12474139 (+)
G575758 NA other downstream 925445 12542017 ~ 12542481 (+)
G576160 NA other downstream 1556212 13172784 ~ 13173074 (+)

Expression


Co-expression Network