G574834


Basic Information

Item Value
gene id G574834
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 11695277 ~ 11697631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU655441
ATGTTCCTGTAGCTGGGCTTCATGCTGGCGGTTGAGCTGCTCATGTTGCCTCTGGAACTCAGCGATGAGGTGCTGTCTCTGAATCTGTTGTTTCTGTTTCAGGGACAGGAGCTCCTGCTGTAGCTGCTGCTCTCTGGCCTGGGCTGCAGACGCCTGGGCTGCAGAAGGAGACATGGACAGCTGCTGCTGGTGATGGTGCTGGTCAATGCGTAGGTCCATGGGGATGGCAGCCGGGGGCAGACGCAGGGGCAGGGCAGAGTTAATACCCATCAGCGCTGTAGTGAGCATGGCGATAaacgctctcctctctttcccccctcctaTCGTTTCCTCCTCTACAGCTCGTCTCTGCCGTGTGTAAGGATCTATTTAGCTTTAGTGGTGCTGCTCTTTATATTTCTGTcagtctctgtcctcctctcctttcctcagttCTCTGTTCTGCTTTCTCAACACTCCTGCTCCCTCGCTAGctacctctctctgtgtccctcctcTGTCTTTACCCATCTgtgtccctcccctctcccacttCCCTCTTTTTACCAGTCTgtgtccctcccctctccctctttttacCAGTCTgtgtc

Function

NR:

description
histone deacetylase 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU655441 True 590 lncRNA 0.55 2 11695277 11697631

Neighbor

gene id symbol gene type direction distance location
LOC110528830 LOC106575616 coding upstream 67156 11536906 ~ 11628121 (+)
LOC118965246 LOC106574739 coding upstream 196410 11496553 ~ 11498867 (+)
LOC110495463 LOC106575569 coding upstream 265169 11016278 ~ 11430108 (+)
LOC110527184 LOC106575653 coding upstream 789568 10900155 ~ 10905709 (+)
LOC110527185 LOC106574771 coding upstream 800609 10805952 ~ 10894671 (+)
LOC110495474 LOC106573985 coding downstream 46323 11743954 ~ 11750311 (+)
LOC110495473 LOC106575640 coding downstream 59100 11756731 ~ 11764384 (+)
LOC118965247 LOC106575639 coding downstream 76831 11774462 ~ 11776663 (+)
LOC110497002 il8r coding downstream 128871 11826502 ~ 11836170 (+)
LOC110528828 tns1 coding downstream 163537 11861168 ~ 12118392 (+)
G574812 NA non-coding upstream 18801 11652019 ~ 11676476 (+)
G574809 NA non-coding upstream 46808 11648195 ~ 11648469 (+)
G574792 NA non-coding upstream 78705 11615274 ~ 11616572 (+)
G574791 NA non-coding upstream 109616 11584872 ~ 11585661 (+)
G574790 NA non-coding upstream 110674 11584400 ~ 11584603 (+)
G574853 NA non-coding downstream 30990 11728621 ~ 11728988 (+)
G575015 NA non-coding downstream 42923 11740554 ~ 11740815 (+)
G575020 NA non-coding downstream 48659 11746290 ~ 11746494 (+)
G575021 NA non-coding downstream 48986 11746617 ~ 11746927 (+)
G574754 NA other upstream 206773 11485253 ~ 11488504 (+)
G574348 NA other upstream 345424 11349349 ~ 11349853 (+)
G574284 NA other upstream 444497 11250099 ~ 11250780 (+)
G574244 NA other upstream 498030 11178796 ~ 11197247 (+)
LOC110528829 LOC106574706 other downstream 766621 12400616 ~ 12474139 (+)
G575758 NA other downstream 844386 12542017 ~ 12542481 (+)
G576160 NA other downstream 1475153 13172784 ~ 13173074 (+)

Expression


Co-expression Network