G575020


Basic Information

Item Value
gene id G575020
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 11746290 ~ 11746494 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU655705
GGgcactactgtattatagagaacACATAACTACTGTATTGTAGAGAACGcacatactgtattataaagAACACATACTGCATGATAGAGAACACATACTGCATGATGGAGAACACATAACTACTGTATTCTAgagaacacacatactgtattctagagaacacacatactgtattctagagaacacacatactgtattatagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU655705 True 205 lncRNA 0.35 1 11746290 11746494

Neighbor

gene id symbol gene type direction distance location
LOC110528830 LOC106575616 coding upstream 118169 11536906 ~ 11628121 (+)
LOC118965246 LOC106574739 coding upstream 247423 11496553 ~ 11498867 (+)
LOC110495463 LOC106575569 coding upstream 316182 11016278 ~ 11430108 (+)
LOC110527184 LOC106575653 coding upstream 840581 10900155 ~ 10905709 (+)
LOC110527185 LOC106574771 coding upstream 851622 10805952 ~ 10894671 (+)
LOC110495473 LOC106575640 coding downstream 10237 11756731 ~ 11764384 (+)
LOC118965247 LOC106575639 coding downstream 27968 11774462 ~ 11776663 (+)
LOC110497002 il8r coding downstream 80008 11826502 ~ 11836170 (+)
LOC110528828 tns1 coding downstream 114674 11861168 ~ 12118392 (+)
LOC110528845 LOC100194500 coding downstream 433143 12179637 ~ 12187373 (+)
G575015 NA non-coding upstream 5475 11740554 ~ 11740815 (+)
G574853 NA non-coding upstream 17302 11728621 ~ 11728988 (+)
G574834 NA non-coding upstream 48659 11695277 ~ 11697631 (+)
G574812 NA non-coding upstream 69814 11652019 ~ 11676476 (+)
G574809 NA non-coding upstream 97821 11648195 ~ 11648469 (+)
G575021 NA non-coding downstream 123 11746617 ~ 11746927 (+)
G575034 NA non-coding downstream 19328 11765822 ~ 11766418 (+)
G575041 NA non-coding downstream 32790 11779284 ~ 11779817 (+)
G575028 NA non-coding downstream 43221 11789715 ~ 11790835 (+)
G574754 NA other upstream 257786 11485253 ~ 11488504 (+)
G574348 NA other upstream 396437 11349349 ~ 11349853 (+)
G574284 NA other upstream 495510 11250099 ~ 11250780 (+)
G574244 NA other upstream 549043 11178796 ~ 11197247 (+)
LOC110528829 LOC106574706 other downstream 717758 12400616 ~ 12474139 (+)
G575758 NA other downstream 795523 12542017 ~ 12542481 (+)
G576160 NA other downstream 1426290 13172784 ~ 13173074 (+)
G576161 NA other downstream 1426818 13173312 ~ 13207489 (+)

Expression


Co-expression Network