G575021


Basic Information

Item Value
gene id G575021
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 11746617 ~ 11746927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU655706
ttatagagaACACATACATACTGTGTTATAGAGAACACATACATACTGTGTTCTAGAGAACACATACATACTGTGTTCTAGAGAACACATACATACTGTGTTCTAGAGAACACATACATACTGTGTTCTAGagaacacatacatactgtaggaTAGAGGACACGTAACTACTGTAGGATAGAGGACACGTAACTACTGTAGGAGAGAGGACACGTAACTACTGTAGGAGAGAGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU655706 True 236 lncRNA 0.39 2 11746617 11746927

Neighbor

gene id symbol gene type direction distance location
LOC110528830 LOC106575616 coding upstream 118496 11536906 ~ 11628121 (+)
LOC118965246 LOC106574739 coding upstream 247750 11496553 ~ 11498867 (+)
LOC110495463 LOC106575569 coding upstream 316509 11016278 ~ 11430108 (+)
LOC110527184 LOC106575653 coding upstream 840908 10900155 ~ 10905709 (+)
LOC110527185 LOC106574771 coding upstream 851949 10805952 ~ 10894671 (+)
LOC110495473 LOC106575640 coding downstream 9804 11756731 ~ 11764384 (+)
LOC118965247 LOC106575639 coding downstream 27535 11774462 ~ 11776663 (+)
LOC110497002 il8r coding downstream 79575 11826502 ~ 11836170 (+)
LOC110528828 tns1 coding downstream 114241 11861168 ~ 12118392 (+)
LOC110528845 LOC100194500 coding downstream 432710 12179637 ~ 12187373 (+)
G575020 NA non-coding upstream 123 11746290 ~ 11746494 (+)
G575015 NA non-coding upstream 5802 11740554 ~ 11740815 (+)
G574853 NA non-coding upstream 17629 11728621 ~ 11728988 (+)
G574834 NA non-coding upstream 48986 11695277 ~ 11697631 (+)
G574812 NA non-coding upstream 70141 11652019 ~ 11676476 (+)
G575034 NA non-coding downstream 18895 11765822 ~ 11766418 (+)
G575041 NA non-coding downstream 32357 11779284 ~ 11779817 (+)
G575028 NA non-coding downstream 42788 11789715 ~ 11790835 (+)
G575064 NA non-coding downstream 76858 11823785 ~ 11824098 (+)
G574754 NA other upstream 258113 11485253 ~ 11488504 (+)
G574348 NA other upstream 396764 11349349 ~ 11349853 (+)
G574284 NA other upstream 495837 11250099 ~ 11250780 (+)
G574244 NA other upstream 549370 11178796 ~ 11197247 (+)
LOC110528829 LOC106574706 other downstream 717325 12400616 ~ 12474139 (+)
G575758 NA other downstream 795090 12542017 ~ 12542481 (+)
G576160 NA other downstream 1425857 13172784 ~ 13173074 (+)
G576161 NA other downstream 1426385 13173312 ~ 13207489 (+)

Expression


Co-expression Network