G575028


Basic Information

Item Value
gene id G575028
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 11789715 ~ 11790835 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU655716
acaaacataacaaggccgagcccctccatggaaggaccctatcacaaacataacagggccgagcccctccatggaaagagaCTAAATTCTCATATTACAGAGTCCTGCCTTTACATAACATATAGAgtcccctccctctatatgaaAATAGCTTCCCTTGACCTTTCTCCATTATTTTCTTCTCATCTCAGAGCTAGTTCACGCCCACTAACGCTCATATTTGCTTTTGGTTAGGTTATAACGATGGTAGAACCCTTTTCACGTCCTAAAAATAATGTATGCATTGCATGCTTATGTTTCACGCGTTAGTCATGTTATCTTGCTTCCATCCTTCTTCCTGTATCCTTCTAACCATAGTACGTCCAGCTGTCATAAATTTACGTATGGTCCTGGTTAATGTACTCTTTCAAAAAATAGCCTGGGTGTCATCTTTTCTTAATGTGCATGTCCTTGCTACTTCAGCCTGGCAACTAGACCTATTTAATGCTCAGCTCTCCTTAATGGTTCGCTCCAACACACGATACCAGGGCAAACGTCCTGATCATACGCCACCACACAACACTGGATAAACAGAGCCGTTTTCAGTGAAGCTAAAGTGAAATcaaagacaacacaacagtaaacatgtcgtcTCCCATGAATGACAACTACAGTTGCTGAAGTGTAAGATTAGGTTCTTTGTAAGACGTGTGGCATGAcagagttggcaagagcacaagcAAACAGATGTACCGTTTCTGCTGTACTGATAATAAAATAAAGTAGGCAGGCCTCTCCACGGTATTACTCCTCACCAGTTTGACAGCTCTACATAACATTCCACCAATCCCTCAGTGGTGCCAACTTGTAACGAGTGGTACTTTACCCTTGACTGAACTCTCTCAAATCTCCACCATTGTCATGTTCCCTAGCAACAGGTAAAAGTCCATGTTTTTGTTATCGCAAGATAATGGATTGTCAAAGGAGATGTAGCTACCCCTGGAAAAGAAAGTCATGGCTGACAAGGATCTAAGGAAACGAGGTCTGGAGTTCTAAGGATCGGTATCTAGATGAAACGGCAAAAAGAAACCAGAAAACAACTTTGGTTGATGACGTGAGATGAATGTCAAACAAGGACTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU655716 True 1121 lncRNA 0.42 1 11789715 11790835

Neighbor

gene id symbol gene type direction distance location
LOC118965247 LOC106575639 coding upstream 13052 11774462 ~ 11776663 (+)
LOC110495473 LOC106575640 coding upstream 25331 11756731 ~ 11764384 (+)
LOC110495474 LOC106573985 coding upstream 39404 11743954 ~ 11750311 (+)
LOC110528830 LOC106575616 coding upstream 161594 11536906 ~ 11628121 (+)
LOC118965246 LOC106574739 coding upstream 290848 11496553 ~ 11498867 (+)
LOC110497002 il8r coding downstream 35667 11826502 ~ 11836170 (+)
LOC110528828 tns1 coding downstream 70333 11861168 ~ 12118392 (+)
LOC110528845 LOC100194500 coding downstream 388802 12179637 ~ 12187373 (+)
LOC110528831 LOC106574695 coding downstream 422303 12213138 ~ 12256113 (+)
LOC110528835 LOC106575602 coding downstream 469109 12259944 ~ 12275532 (+)
G575041 NA non-coding upstream 9898 11779284 ~ 11779817 (+)
G575034 NA non-coding upstream 23297 11765822 ~ 11766418 (+)
G575021 NA non-coding upstream 42788 11746617 ~ 11746927 (+)
G575020 NA non-coding upstream 43221 11746290 ~ 11746494 (+)
G575064 NA non-coding downstream 32950 11823785 ~ 11824098 (+)
G575066 NA non-coding downstream 36144 11826979 ~ 11827301 (+)
G575118 NA non-coding downstream 47676 11838511 ~ 11838746 (+)
G575139 NA non-coding downstream 78121 11868956 ~ 11871885 (+)
G575146 NA non-coding downstream 89059 11879894 ~ 11880482 (+)
G574754 NA other upstream 301211 11485253 ~ 11488504 (+)
G574348 NA other upstream 439862 11349349 ~ 11349853 (+)
G574284 NA other upstream 538935 11250099 ~ 11250780 (+)
LOC110528829 LOC106574706 other downstream 673417 12400616 ~ 12474139 (+)
G575758 NA other downstream 751182 12542017 ~ 12542481 (+)
G576160 NA other downstream 1381949 13172784 ~ 13173074 (+)
G576161 NA other downstream 1382477 13173312 ~ 13207489 (+)

Expression


Co-expression Network