G575118


Basic Information

Item Value
gene id G575118
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 11838511 ~ 11838746 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU655820
ccttctctttctcctcatccctcttcacattacctcctctctcttcctgtctctccttctctttctcctcatcactCTTCACATGAtcgcctctctcttcctgtctcctctttctcctcatccctcttcacataacctcctctctcttcctgtctctccttcacttTCTTTATTGGCTACATCTTTCCCTTCTTCCTCAGTGCACCCTATTCCTGTCCTCCTTCACCCAtctcttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU655820 True 236 lncRNA 0.48 1 11838511 11838746

Neighbor

gene id symbol gene type direction distance location
LOC110497002 il8r coding upstream 2341 11826502 ~ 11836170 (+)
LOC118965247 LOC106575639 coding upstream 61848 11774462 ~ 11776663 (+)
LOC110495473 LOC106575640 coding upstream 74127 11756731 ~ 11764384 (+)
LOC110495474 LOC106573985 coding upstream 88200 11743954 ~ 11750311 (+)
LOC110528830 LOC106575616 coding upstream 210390 11536906 ~ 11628121 (+)
LOC110528828 tns1 coding downstream 22422 11861168 ~ 12118392 (+)
LOC110528845 LOC100194500 coding downstream 340891 12179637 ~ 12187373 (+)
LOC110528831 LOC106574695 coding downstream 374392 12213138 ~ 12256113 (+)
LOC110528835 LOC106575602 coding downstream 421198 12259944 ~ 12275532 (+)
LOC110528723 LOC106592612 coding downstream 448842 12287588 ~ 12352864 (+)
G575066 NA non-coding upstream 11210 11826979 ~ 11827301 (+)
G575064 NA non-coding upstream 14413 11823785 ~ 11824098 (+)
G575028 NA non-coding upstream 47676 11789715 ~ 11790835 (+)
G575041 NA non-coding upstream 58694 11779284 ~ 11779817 (+)
G575034 NA non-coding upstream 72093 11765822 ~ 11766418 (+)
G575139 NA non-coding downstream 30210 11868956 ~ 11871885 (+)
G575146 NA non-coding downstream 41148 11879894 ~ 11880482 (+)
G575149 NA non-coding downstream 52752 11891498 ~ 11891703 (+)
G575150 NA non-coding downstream 53412 11892158 ~ 11892661 (+)
G575153 NA non-coding downstream 70375 11909121 ~ 11909708 (+)
LOC118965246 LOC106574739 other upstream 340595 11496553 ~ 11498867 (+)
G574754 NA other upstream 350007 11485253 ~ 11488504 (+)
G574348 NA other upstream 488658 11349349 ~ 11349853 (+)
LOC110528829 LOC106574706 other downstream 625506 12400616 ~ 12474139 (+)
G575758 NA other downstream 703271 12542017 ~ 12542481 (+)
G576160 NA other downstream 1334038 13172784 ~ 13173074 (+)
G576161 NA other downstream 1334566 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 1647770 13486516 ~ 13489737 (+)

Expression


Co-expression Network