G575158


Basic Information

Item Value
gene id G575158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 11930105 ~ 11930522 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU655896
tctgataactctgatgtgtagactttccactgtagagtttatgttctcagatgacaaccgaactgacatcatgtCACGGTTTCCTTgacttgaaggagaggcggaccaaaatgcagcgtggtttctattcatggtttttaataaagactctacacatgaacaaactaacaaaacaagaaacgtgaaaacccaaaacagccctatctggtgcaaacacagagacaggaacaatcacccacaaaacccaacaccaaacaggctacctaaatatggttcccaatcagagacaatgactaacacctgcctctgattgagaaccatatcaggccaaacatagaaatagacaaactagacatgtaacatagaatgcccactcagatcacaccctgaccaaacaaaacatataaacatacaaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU655896 True 418 lncRNA 0.41 1 11930105 11930522

Neighbor

gene id symbol gene type direction distance location
LOC110497002 il8r coding upstream 93935 11826502 ~ 11836170 (+)
LOC118965247 LOC106575639 coding upstream 153442 11774462 ~ 11776663 (+)
LOC110495473 LOC106575640 coding upstream 165721 11756731 ~ 11764384 (+)
LOC110495474 LOC106573985 coding upstream 179794 11743954 ~ 11750311 (+)
LOC110528830 LOC106575616 coding upstream 301984 11536906 ~ 11628121 (+)
LOC110528845 LOC100194500 coding downstream 249115 12179637 ~ 12187373 (+)
LOC110528831 LOC106574695 coding downstream 282616 12213138 ~ 12256113 (+)
LOC110528835 LOC106575602 coding downstream 329422 12259944 ~ 12275532 (+)
LOC110528723 LOC106592612 coding downstream 357066 12287588 ~ 12352864 (+)
LOC110528846 LOC106574744 coding downstream 423326 12353848 ~ 12364044 (+)
G575156 NA non-coding upstream 2588 11927311 ~ 11927517 (+)
G575155 NA non-coding upstream 17691 11912148 ~ 11912414 (+)
G575154 NA non-coding upstream 18320 11911545 ~ 11911785 (+)
G575153 NA non-coding upstream 20397 11909121 ~ 11909708 (+)
G575150 NA non-coding upstream 37444 11892158 ~ 11892661 (+)
G575163 NA non-coding downstream 16277 11946799 ~ 11947002 (+)
G575166 NA non-coding downstream 26825 11957347 ~ 11967809 (+)
G575184 NA non-coding downstream 59621 11990143 ~ 11990467 (+)
G575134 NA non-coding downstream 66782 11997304 ~ 12072774 (+)
G575232 NA non-coding downstream 188351 12118873 ~ 12119785 (+)
LOC118965246 LOC106574739 other upstream 432189 11496553 ~ 11498867 (+)
G574754 NA other upstream 441601 11485253 ~ 11488504 (+)
G574348 NA other upstream 580252 11349349 ~ 11349853 (+)
LOC110528829 LOC106574706 other downstream 533730 12400616 ~ 12474139 (+)
G575758 NA other downstream 611495 12542017 ~ 12542481 (+)
G576160 NA other downstream 1242262 13172784 ~ 13173074 (+)
G576161 NA other downstream 1242790 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 1555994 13486516 ~ 13489737 (+)

Expression


Co-expression Network