G575371


Basic Information

Item Value
gene id G575371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12054854 ~ 12070933 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656129
aacagattcAGATTATCAAGGGCTAATCTCTTAACAAGGGGTGACAGGCTTGAAAGTACTgtggactgagagggagagaaagaaagagggatagagtcACAGCAtctgagaggagagaaaacaaGCCCCCTGAAAGACAAATCCACCCACAATGCAACAGATAAAAACTAAAGAAACATACTATATCCCTGACGTGTAGACTGGCTGCATCGCCTGGTAAATCTTCAGGAAAGGACGACAGCCTGCGAAGGGAAGAAAAGAAGAAAAGAAGAAAAAACTCACCTCCTTTGGACTCGAAGTTGGGGATGCCGTGCATGATGACGTGGTGCAGGAACAGAGGCTTGTTGTTAATCTTGATGTGGCCAGAGAGCAGACCACTGAAGTAACGCACATAcctacacacatccacacaacacagTCACAGCGTGAAACAGAGGGACAATCCTTCAGTGTCATGCACCATGAGTCTGGCAAGCAAGACTAGCAAGCACGCCCCATCTATTATCAAAGAGGCTTCGCACACTATGGAGATGTCAGAGTGAATTGGAGTGTATGAGGACCAGGCCGCTCTGCCTGCCAGtgcttgggtgattgtccttagagatgccagtctgcaaggagccgccagagctgccagtctgcaaggagccgccagtctgcatggagcagccagggccgccagtcagcatggagcagccagagccgccagtcagcatggagcagccagagccgccagtcagcatgga

Function

NR:

description
LOW QUALITY PROTEIN: tensin-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU656129 True 746 lncRNA 0.51 3 12054854 12070933
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110515532 NA coding downstream 210123 11840744 ~ 11844731 (-)
LOC110495471 LOC106575630 coding downstream 245196 11791209 ~ 11809658 (-)
LOC110497003 LOC106575637 coding downstream 280453 11769813 ~ 11774401 (-)
LOC110495475 LOC106575627 coding downstream 311127 11742450 ~ 11743727 (-)
LOC110528724 LOC106575641 coding downstream 324402 11655683 ~ 11730452 (-)
LOC110528844 igfbp-2a coding upstream 116971 12187904 ~ 12204994 (-)
LOC110528842 inh coding upstream 204713 12275646 ~ 12277419 (-)
LOC110528827 LOC106574694 coding upstream 293170 12364103 ~ 12392300 (-)
LOC110528833 LOC106574707 coding upstream 403334 12474267 ~ 12485521 (-)
LOC110527309 LOC106575526 coding upstream 522100 12593033 ~ 12599186 (-)
G575342 NA non-coding downstream 63755 11990728 ~ 11991099 (-)
G575323 NA non-coding downstream 108218 11946377 ~ 11946636 (-)
G575321 NA non-coding downstream 122642 11931986 ~ 11932212 (-)
G575319 NA non-coding downstream 125115 11929402 ~ 11929739 (-)
G575318 NA non-coding downstream 129487 11925167 ~ 11925367 (-)
G575384 NA non-coding upstream 2913 12073846 ~ 12075911 (-)
G575394 NA non-coding upstream 18524 12089457 ~ 12108180 (-)
G575422 NA non-coding upstream 64149 12135082 ~ 12135380 (-)
G575463 NA non-coding upstream 144920 12215853 ~ 12216227 (-)
G575468 NA non-coding upstream 155854 12226787 ~ 12231915 (-)
G574619 NA other downstream 847061 11207338 ~ 11207793 (-)
G573892 NA other downstream 1373091 10679955 ~ 10681763 (-)
G573769 NA other downstream 1598819 10408141 ~ 10456035 (-)
G575380 NA other upstream 498 12071431 ~ 12187360 (-)
G575511 NA other upstream 207643 12278576 ~ 12278893 (-)
G575666 NA other upstream 277713 12348646 ~ 12349739 (-)
G575725 NA other upstream 389696 12460629 ~ 12461052 (-)
G575727 NA other upstream 391183 12462116 ~ 12462541 (-)

Expression

G575371 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
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G575371 Expression in each Bioproject

Bar chart with 10 bars.
G575371 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network