Gene
RNA
| Item | Value |
|---|---|
| gene id | G575275 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 12205331 ~ 12205530 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU656031 | True | 200 | lncRNA | 0.42 | 1 | 12205331 | 12205530 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528845 | LOC100194500 | coding | upstream | 17958 | 12179637 ~ 12187373 (+) |
| LOC110528828 | tns1 | coding | upstream | 86939 | 11861168 ~ 12118392 (+) |
| LOC110497002 | il8r | coding | upstream | 369161 | 11826502 ~ 11836170 (+) |
| LOC118965247 | LOC106575639 | coding | upstream | 428668 | 11774462 ~ 11776663 (+) |
| LOC110495473 | LOC106575640 | coding | upstream | 440947 | 11756731 ~ 11764384 (+) |
| LOC110528831 | LOC106574695 | coding | downstream | 7608 | 12213138 ~ 12256113 (+) |
| LOC110528835 | LOC106575602 | coding | downstream | 54414 | 12259944 ~ 12275532 (+) |
| LOC110528723 | LOC106592612 | coding | downstream | 82058 | 12287588 ~ 12352864 (+) |
| LOC110528846 | LOC106574744 | coding | downstream | 148318 | 12353848 ~ 12364044 (+) |
| LOC110528829 | LOC106574706 | coding | downstream | 195086 | 12400616 ~ 12474139 (+) |
| G575265 | NA | non-coding | upstream | 14084 | 12187908 ~ 12191247 (+) |
| G575232 | NA | non-coding | upstream | 85546 | 12118873 ~ 12119785 (+) |
| G575134 | NA | non-coding | upstream | 132557 | 11997304 ~ 12072774 (+) |
| G575184 | NA | non-coding | upstream | 214864 | 11990143 ~ 11990467 (+) |
| G575166 | NA | non-coding | upstream | 237522 | 11957347 ~ 11967809 (+) |
| G575276 | NA | non-coding | downstream | 63 | 12205593 ~ 12205805 (+) |
| G575268 | NA | non-coding | downstream | 7202 | 12212732 ~ 12212997 (+) |
| G575489 | NA | non-coding | downstream | 51962 | 12257492 ~ 12257945 (+) |
| G575533 | NA | non-coding | downstream | 100506 | 12306036 ~ 12311314 (+) |
| LOC110495474 | LOC106573985 | other | upstream | 455176 | 11743954 ~ 11750311 (+) |
| LOC118965246 | LOC106574739 | other | upstream | 707415 | 11496553 ~ 11498867 (+) |
| G574754 | NA | other | upstream | 716827 | 11485253 ~ 11488504 (+) |
| G574348 | NA | other | upstream | 855478 | 11349349 ~ 11349853 (+) |
| G575758 | NA | other | downstream | 336487 | 12542017 ~ 12542481 (+) |
| G576160 | NA | other | downstream | 967254 | 13172784 ~ 13173074 (+) |
| G576161 | NA | other | downstream | 967782 | 13173312 ~ 13207489 (+) |
| G576241 | LOC106575516 | other | downstream | 1280986 | 13486516 ~ 13489737 (+) |
