G575489


Basic Information

Item Value
gene id G575489
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12257492 ~ 12257945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656265
GAGATGAAGATGTGGGGACATTTTCTCTGCTTGTGTGAGAAGGATTGGGATAGTAGTGTTAAATATCACAACATACACACTTCCTGCAACACTTCCTTCTTGGGGCCCTTGACACTGCTCTGGCAATGCTACTCAAGCGTTGCCCACCCCTGGGAGAAGACAGCAGTGTCCCAGTCCTGCTGTCACTGCCATGCAGGGAGGGGGCTTTCTTCTGTTTGTTTTTCCAGAGTAAAGACCAACAGTTCCTTATTGAGCACTGTGAATGACACCAGAGAGAGTCAACATACCACCTGTAAGTAGTAAATATACCCCCCATGAAAAAATATTGCAGTTAgcgtgcagtataactacagtatgctgcaaatactgcactcaaaataaataaaaatgtactgcagtaattttgcagtgtaactgcagttagaATGCAGTAGAACTGCAGAaaactgcagtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU656265 True 454 lncRNA 0.44 1 12257492 12257945

Neighbor

gene id symbol gene type direction distance location
LOC110528831 LOC106574695 coding upstream 1379 12213138 ~ 12256113 (+)
LOC110528845 LOC100194500 coding upstream 70119 12179637 ~ 12187373 (+)
LOC110528828 tns1 coding upstream 139100 11861168 ~ 12118392 (+)
LOC110497002 il8r coding upstream 421322 11826502 ~ 11836170 (+)
LOC118965247 LOC106575639 coding upstream 480829 11774462 ~ 11776663 (+)
LOC110528835 LOC106575602 coding downstream 1999 12259944 ~ 12275532 (+)
LOC110528723 LOC106592612 coding downstream 29643 12287588 ~ 12352864 (+)
LOC110528846 LOC106574744 coding downstream 95903 12353848 ~ 12364044 (+)
LOC110528829 LOC106574706 coding downstream 142671 12400616 ~ 12474139 (+)
LOC110528838 LOC106575524 coding downstream 229956 12487901 ~ 12520663 (+)
G575268 NA non-coding upstream 44495 12212732 ~ 12212997 (+)
G575276 NA non-coding upstream 51687 12205593 ~ 12205805 (+)
G575275 NA non-coding upstream 51962 12205331 ~ 12205530 (+)
G575265 NA non-coding upstream 66245 12187908 ~ 12191247 (+)
G575533 NA non-coding downstream 48091 12306036 ~ 12311314 (+)
G575557 NA non-coding downstream 121978 12379923 ~ 12382780 (+)
G575564 NA non-coding downstream 137739 12395684 ~ 12395911 (+)
G575565 NA non-coding downstream 138725 12396670 ~ 12396884 (+)
G575568 NA non-coding downstream 141755 12399700 ~ 12453059 (+)
LOC110495474 LOC106573985 other upstream 507337 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 759576 11496553 ~ 11498867 (+)
G574754 NA other upstream 768988 11485253 ~ 11488504 (+)
G574348 NA other upstream 907639 11349349 ~ 11349853 (+)
G575758 NA other downstream 284072 12542017 ~ 12542481 (+)
G576160 NA other downstream 914839 13172784 ~ 13173074 (+)
G576161 NA other downstream 915367 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 1228571 13486516 ~ 13489737 (+)

Expression


Co-expression Network