Gene
RNA
| Item | Value |
|---|---|
| gene id | G575557 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 12379923 ~ 12382780 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU656344 | True | 425 | lncRNA | 0.33 | 2 | 12379923 | 12382780 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528846 | LOC106574744 | coding | upstream | 15879 | 12353848 ~ 12364044 (+) |
| LOC110528723 | LOC106592612 | coding | upstream | 27059 | 12287588 ~ 12352864 (+) |
| LOC110528835 | LOC106575602 | coding | upstream | 104391 | 12259944 ~ 12275532 (+) |
| LOC110528831 | LOC106574695 | coding | upstream | 123810 | 12213138 ~ 12256113 (+) |
| LOC110528845 | LOC100194500 | coding | upstream | 192550 | 12179637 ~ 12187373 (+) |
| LOC110528829 | LOC106574706 | coding | downstream | 17836 | 12400616 ~ 12474139 (+) |
| LOC110528838 | LOC106575524 | coding | downstream | 105121 | 12487901 ~ 12520663 (+) |
| LOC110527307 | LOC106575529 | coding | downstream | 166421 | 12549201 ~ 12556506 (+) |
| LOC110527093 | NA | coding | downstream | 185396 | 12568176 ~ 12568569 (+) |
| LOC110527308 | fam171b | coding | downstream | 202776 | 12585556 ~ 12594004 (+) |
| G575533 | NA | non-coding | upstream | 68609 | 12306036 ~ 12311314 (+) |
| G575489 | NA | non-coding | upstream | 121978 | 12257492 ~ 12257945 (+) |
| G575268 | NA | non-coding | upstream | 166926 | 12212732 ~ 12212997 (+) |
| G575276 | NA | non-coding | upstream | 174118 | 12205593 ~ 12205805 (+) |
| G575564 | NA | non-coding | downstream | 12904 | 12395684 ~ 12395911 (+) |
| G575565 | NA | non-coding | downstream | 13890 | 12396670 ~ 12396884 (+) |
| G575568 | NA | non-coding | downstream | 16920 | 12399700 ~ 12453059 (+) |
| G575612 | NA | non-coding | downstream | 74562 | 12457342 ~ 12457745 (+) |
| G575614 | NA | non-coding | downstream | 79450 | 12462230 ~ 12462507 (+) |
| LOC110497002 | il8r | other | upstream | 544608 | 11826502 ~ 11836170 (+) |
| LOC110495474 | LOC106573985 | other | upstream | 629768 | 11743954 ~ 11750311 (+) |
| LOC118965246 | LOC106574739 | other | upstream | 882007 | 11496553 ~ 11498867 (+) |
| G574754 | NA | other | upstream | 891419 | 11485253 ~ 11488504 (+) |
| G574348 | NA | other | upstream | 1030070 | 11349349 ~ 11349853 (+) |
| G575758 | NA | other | downstream | 159237 | 12542017 ~ 12542481 (+) |
| G576160 | NA | other | downstream | 790004 | 13172784 ~ 13173074 (+) |
| G576161 | NA | other | downstream | 790532 | 13173312 ~ 13207489 (+) |
| G576241 | LOC106575516 | other | downstream | 1103736 | 13486516 ~ 13489737 (+) |
