G575564


Basic Information

Item Value
gene id G575564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12395684 ~ 12395911 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656352
gtgactgggcccATTACAACAGTTTGACTACAGCTTGTATGGTGAGTGACTGGGCCCATTACAACAGTTTGACTACAGCTTgtatgttaagtgactgggcccATTACAACAGTTTGACTACAGCTTCTATGGTGATTGACTGGGCCCATTACAACAGTTTGACTACAGCTTGTATGGTGAGAGACTGGGCCCATAACAACAGTTTGACTACAGCTTGTATGGTGAGAG

Function

NR:

description
PREDICTED: putative proline-rich protein 21

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU656352 True 228 lncRNA 0.46 1 12395684 12395911

Neighbor

gene id symbol gene type direction distance location
LOC110528846 LOC106574744 coding upstream 31640 12353848 ~ 12364044 (+)
LOC110528723 LOC106592612 coding upstream 42820 12287588 ~ 12352864 (+)
LOC110528835 LOC106575602 coding upstream 120152 12259944 ~ 12275532 (+)
LOC110528831 LOC106574695 coding upstream 139571 12213138 ~ 12256113 (+)
LOC110528845 LOC100194500 coding upstream 208311 12179637 ~ 12187373 (+)
LOC110528829 LOC106574706 coding downstream 4705 12400616 ~ 12474139 (+)
LOC110528838 LOC106575524 coding downstream 91990 12487901 ~ 12520663 (+)
LOC110527307 LOC106575529 coding downstream 153290 12549201 ~ 12556506 (+)
LOC110527093 NA coding downstream 172265 12568176 ~ 12568569 (+)
LOC110527308 fam171b coding downstream 189645 12585556 ~ 12594004 (+)
G575557 NA non-coding upstream 12904 12379923 ~ 12382780 (+)
G575533 NA non-coding upstream 84370 12306036 ~ 12311314 (+)
G575489 NA non-coding upstream 137739 12257492 ~ 12257945 (+)
G575268 NA non-coding upstream 182687 12212732 ~ 12212997 (+)
G575565 NA non-coding downstream 759 12396670 ~ 12396884 (+)
G575568 NA non-coding downstream 3789 12399700 ~ 12453059 (+)
G575612 NA non-coding downstream 61431 12457342 ~ 12457745 (+)
G575614 NA non-coding downstream 66319 12462230 ~ 12462507 (+)
G575570 NA non-coding downstream 79872 12475783 ~ 12478768 (+)
LOC110497002 il8r other upstream 560369 11826502 ~ 11836170 (+)
LOC110495474 LOC106573985 other upstream 645529 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 897768 11496553 ~ 11498867 (+)
G574754 NA other upstream 907180 11485253 ~ 11488504 (+)
G574348 NA other upstream 1045831 11349349 ~ 11349853 (+)
G575758 NA other downstream 146106 12542017 ~ 12542481 (+)
G576160 NA other downstream 776873 13172784 ~ 13173074 (+)
G576161 NA other downstream 777401 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 1090605 13486516 ~ 13489737 (+)

Expression


Co-expression Network