G575565


Basic Information

Item Value
gene id G575565
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12396670 ~ 12396884 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656353
GATATTTCAAAATGGCCTCCCGTGATGTGATTACCAATCACCTCAGGTTTTGTATCCCCATTGTGATTGGTCCCTGAACTCACCGGAGGCAATTTTGAAATATATAAAAATCTCTCCTTCATTTTCTTCTGTAAAAACCAAAGAGAGTAAACCTTGATGAAGGTTAGGGCAGAAACCCGTAGGTTTTATGGTTGACAACAAATAAACTATTTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU656353 True 215 lncRNA 0.37 1 12396670 12396884

Neighbor

gene id symbol gene type direction distance location
LOC110528846 LOC106574744 coding upstream 32626 12353848 ~ 12364044 (+)
LOC110528723 LOC106592612 coding upstream 43806 12287588 ~ 12352864 (+)
LOC110528835 LOC106575602 coding upstream 121138 12259944 ~ 12275532 (+)
LOC110528831 LOC106574695 coding upstream 140557 12213138 ~ 12256113 (+)
LOC110528845 LOC100194500 coding upstream 209297 12179637 ~ 12187373 (+)
LOC110528829 LOC106574706 coding downstream 3732 12400616 ~ 12474139 (+)
LOC110528838 LOC106575524 coding downstream 91017 12487901 ~ 12520663 (+)
LOC110527307 LOC106575529 coding downstream 152317 12549201 ~ 12556506 (+)
LOC110527093 NA coding downstream 171292 12568176 ~ 12568569 (+)
LOC110527308 fam171b coding downstream 188672 12585556 ~ 12594004 (+)
G575564 NA non-coding upstream 759 12395684 ~ 12395911 (+)
G575557 NA non-coding upstream 13890 12379923 ~ 12382780 (+)
G575533 NA non-coding upstream 85356 12306036 ~ 12311314 (+)
G575489 NA non-coding upstream 138725 12257492 ~ 12257945 (+)
G575568 NA non-coding downstream 2816 12399700 ~ 12453059 (+)
G575612 NA non-coding downstream 60458 12457342 ~ 12457745 (+)
G575614 NA non-coding downstream 65346 12462230 ~ 12462507 (+)
G575570 NA non-coding downstream 78899 12475783 ~ 12478768 (+)
G575616 NA non-coding downstream 82323 12479207 ~ 12479912 (+)
LOC110497002 il8r other upstream 561355 11826502 ~ 11836170 (+)
LOC110495474 LOC106573985 other upstream 646515 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 898754 11496553 ~ 11498867 (+)
G574754 NA other upstream 908166 11485253 ~ 11488504 (+)
G574348 NA other upstream 1046817 11349349 ~ 11349853 (+)
G575758 NA other downstream 145133 12542017 ~ 12542481 (+)
G576160 NA other downstream 775900 13172784 ~ 13173074 (+)
G576161 NA other downstream 776428 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 1089632 13486516 ~ 13489737 (+)

Expression


Co-expression Network