G575804 (LOC106575526)



Basic Information


Item Value
gene id G575804
gene name LOC106575526
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12595178 ~ 12595925 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU656632
ACCTTGTACTTGGCACTGCGCTTTGTGTTACCTGTAGTGGCAGTGACTCACCTGTAGGGGCAGGAAGGCGCTGTAGAGCAGGTCTGCCAGCGACAGGTTGATGGCAAACACAGACGTGGGAGTGTGGTGTTTGTAATGGACATTCAGCAGTGCTACCAGAGACAGCAGGTTGCAGGGCGTactgcacacaaacacagacaggtaAATAACAGGCACAGCCAGGGTCATCACAGGACTGACCAGCATCTCCAGGGTGGCATTGTTGACCCCTCTGGCCACCTCTACTGAGATGTTCATCATGACTGACCACAACAGTAACTTGACCACAGCAACAGGGGGAGTTGACCAGGGTGACCGGTCCTGTCACTTAGGTTGGTGTACAAGCATCACTGGGAATGATAAGGGAAGAAAAGAGAGTGTTATATATTTCATTTGAATACACCAAAACCACACCATGTTAGAGGAAGTGAAAGATATTGGTTAGGCAATGAGAGAGTAGTGTTGTTGAATGCAGAAACAGTGTGATGCCAATTCATCCATGTGAAAGACGAACAATGTTTTCCCCTCACACTATACTAATGTTACACTAGTTTCACTATTCACACTGTGACTACAACTGGAGAAAGCCCCTGATGTTCCCTTAAGGGGTGAAGTTATTGTAATGCTCACATGGGTCTTTCCATCATGCCTATTTCACATCTGTGTATGTGGAAATACAAATTGGAACAGGAAATGTCCTGTCATAAAC

Function


NR:

description
P2Y purinoceptor 8-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU656632 True 748 lncRNA 0.46 1 12595178 12595925

Neighbor


gene id symbol gene type direction distance location
LOC110527308 fam171b coding upstream 1174 12585556 ~ 12594004 (+)
LOC110527093 NA coding upstream 26609 12568176 ~ 12568569 (+)
LOC110527307 LOC106575529 coding upstream 38672 12549201 ~ 12556506 (+)
LOC110528838 LOC106575524 coding upstream 74515 12487901 ~ 12520663 (+)
LOC110528829 LOC106574706 coding upstream 121039 12400616 ~ 12474139 (+)
LOC110527311 LOC106575461 coding downstream 24938 12620863 ~ 12693768 (+)
LOC110527313 LOC106575531 coding downstream 168884 12764809 ~ 12767812 (+)
LOC110527314 LOC106599837 coding downstream 172425 12768350 ~ 12774730 (+)
LOC110527315 LOC106574719 coding downstream 185458 12781383 ~ 12794388 (+)
LOC110527316 LOC106575583 coding downstream 212551 12808476 ~ 12814546 (+)
G575767 NA non-coding upstream 42753 12550823 ~ 12552425 (+)
G575752 NA non-coding upstream 68648 12526228 ~ 12526530 (+)
G575619 LOC106574707 non-coding upstream 110514 12483954 ~ 12484664 (+)
G575618 LOC106574707 non-coding upstream 113846 12480344 ~ 12481332 (+)
G575617 NA non-coding upstream 114914 12479996 ~ 12480264 (+)
G575805 NA non-coding downstream 57 12595982 ~ 12596239 (+)
G575808 NA non-coding downstream 2346 12598271 ~ 12598499 (+)
G575809 LOC106574666 non-coding downstream 4544 12600469 ~ 12601529 (+)
G575811 NA non-coding downstream 7027 12602952 ~ 12603241 (+)
G575812 NA non-coding downstream 7510 12603435 ~ 12603980 (+)
G575758 NA other upstream 52697 12542017 ~ 12542481 (+)
LOC110497002 il8r other upstream 759863 11826502 ~ 11836170 (+)
LOC110495474 LOC106573985 other upstream 845023 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 1097262 11496553 ~ 11498867 (+)
G576160 NA other downstream 576859 13172784 ~ 13173074 (+)
G576161 NA other downstream 577387 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 890591 13486516 ~ 13489737 (+)
G577180 LOC106574637 other downstream 1519411 14115016 ~ 14116345 (+)
LOC110527359 LOC106574634 other downstream 1550145 14146070 ~ 14159585 (+)

Expression



Co-expression Network