G575813


Basic Information

Item Value
gene id G575813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12604267 ~ 12604480 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656641
aaattgtagacctgcaccaggctgggaagactgaatctgcaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatacaagaccactgataatctccctcgatctagggctccacgcaagatctcaccctgtggggtcaaaatgatcacaagaacggtgagcaaaaatcccagaaccacacgggggacctagtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU656641 True 214 lncRNA 0.47 1 12604267 12604480

Neighbor

gene id symbol gene type direction distance location
LOC110527308 fam171b coding upstream 10263 12585556 ~ 12594004 (+)
LOC110527093 NA coding upstream 35698 12568176 ~ 12568569 (+)
LOC110527307 LOC106575529 coding upstream 47761 12549201 ~ 12556506 (+)
LOC110528838 LOC106575524 coding upstream 83604 12487901 ~ 12520663 (+)
LOC110528829 LOC106574706 coding upstream 130128 12400616 ~ 12474139 (+)
LOC110527311 LOC106575461 coding downstream 16383 12620863 ~ 12693768 (+)
LOC110527313 LOC106575531 coding downstream 160329 12764809 ~ 12767812 (+)
LOC110527314 LOC106599837 coding downstream 163870 12768350 ~ 12774730 (+)
LOC110527315 LOC106574719 coding downstream 176903 12781383 ~ 12794388 (+)
LOC110527316 LOC106575583 coding downstream 203996 12808476 ~ 12814546 (+)
G575812 NA non-coding upstream 287 12603435 ~ 12603980 (+)
G575811 NA non-coding upstream 1026 12602952 ~ 12603241 (+)
G575809 LOC106574666 non-coding upstream 2738 12600469 ~ 12601529 (+)
G575808 NA non-coding upstream 5768 12598271 ~ 12598499 (+)
G575805 NA non-coding upstream 8028 12595982 ~ 12596239 (+)
G575819 NA non-coding downstream 5860 12610340 ~ 12610589 (+)
G575820 NA non-coding downstream 6227 12610707 ~ 12610921 (+)
G575838 NA non-coding downstream 41982 12646462 ~ 12663204 (+)
G575852 NA non-coding downstream 62892 12667372 ~ 12667876 (+)
G575862 NA non-coding downstream 80593 12685073 ~ 12685404 (+)
G575758 NA other upstream 61786 12542017 ~ 12542481 (+)
LOC110497002 il8r other upstream 768952 11826502 ~ 11836170 (+)
LOC110495474 LOC106573985 other upstream 854112 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 1106351 11496553 ~ 11498867 (+)
G576160 NA other downstream 568304 13172784 ~ 13173074 (+)
G576161 NA other downstream 568832 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 882036 13486516 ~ 13489737 (+)
G577180 LOC106574637 other downstream 1510856 14115016 ~ 14116345 (+)
LOC110527359 LOC106574634 other downstream 1541590 14146070 ~ 14159585 (+)

Expression


Co-expression Network