G575838


Basic Information

Item Value
gene id G575838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12646462 ~ 12663204 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656673
tctctctcactctctctctctctctctctctctctctctctctctctctctctctttctctctctctctctctctctctctctctttctctctctctctttctctctctctctttctctctctctctttctctttctctctctttcactctctttcactctatcactctctctttctcgctctctctctctctctttctcttgttctttttCACACACTCATCTGCATATGTAGTAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU656673 True 239 lncRNA 0.43 2 12646462 12663204

Neighbor

gene id symbol gene type direction distance location
LOC110527308 fam171b coding upstream 52458 12585556 ~ 12594004 (+)
LOC110527093 NA coding upstream 77893 12568176 ~ 12568569 (+)
LOC110527307 LOC106575529 coding upstream 89956 12549201 ~ 12556506 (+)
LOC110528838 LOC106575524 coding upstream 125799 12487901 ~ 12520663 (+)
LOC110528829 LOC106574706 coding upstream 172323 12400616 ~ 12474139 (+)
LOC110527313 LOC106575531 coding downstream 101605 12764809 ~ 12767812 (+)
LOC110527314 LOC106599837 coding downstream 105146 12768350 ~ 12774730 (+)
LOC110527315 LOC106574719 coding downstream 118179 12781383 ~ 12794388 (+)
LOC110527316 LOC106575583 coding downstream 145272 12808476 ~ 12814546 (+)
LOC110527318 LOC106575584 coding downstream 165393 12828597 ~ 12834338 (+)
G575820 NA non-coding upstream 35541 12610707 ~ 12610921 (+)
G575819 NA non-coding upstream 35873 12610340 ~ 12610589 (+)
G575813 NA non-coding upstream 41982 12604267 ~ 12604480 (+)
G575812 NA non-coding upstream 42482 12603435 ~ 12603980 (+)
G575811 NA non-coding upstream 43221 12602952 ~ 12603241 (+)
G575852 NA non-coding downstream 4168 12667372 ~ 12667876 (+)
G575862 NA non-coding downstream 21869 12685073 ~ 12685404 (+)
G575868 NA non-coding downstream 30798 12694002 ~ 12706237 (+)
G575963 NA non-coding downstream 57920 12721124 ~ 12721375 (+)
G575967 NA non-coding downstream 62903 12726107 ~ 12726409 (+)
G575758 NA other upstream 103981 12542017 ~ 12542481 (+)
LOC110497002 il8r other upstream 811147 11826502 ~ 11836170 (+)
LOC110495474 LOC106573985 other upstream 896307 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 1148546 11496553 ~ 11498867 (+)
G576160 NA other downstream 509580 13172784 ~ 13173074 (+)
G576161 NA other downstream 510108 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 823312 13486516 ~ 13489737 (+)
G577180 LOC106574637 other downstream 1452132 14115016 ~ 14116345 (+)
LOC110527359 LOC106574634 other downstream 1482866 14146070 ~ 14159585 (+)

Expression


Co-expression Network