XLOC_025154 (CU639471.1)


Basic Information

Item Value
gene id XLOC_025154
gene name CU639471.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 14399225 ~ 14399652 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049690
TGTAACCCCACCGTTTCTACTCAACCCAAtccgctctgagctggtatcgaaccgacGACCTTCCGCATAGgaatcggttgctctaacaaggaggctaaagaccatggcttctagtgtcagtcgctagagcacctttagaggtcagaggagtgaggtttacctgcataacacttactagctggcctccgttacactcacccccctaaacctcactcccatccgggtcacggtaCCAATGTAatcccgccggtcctacgccacccaactctctccgagctggtatcaaaccggcgaTATTCCGCATGGGattcgggtgctctaccaaggaggctaaagaccatggctcctagcgtctgtcgctagagcacctttagaggtcagatgagtgaggtttacctgcacagcacttactagctggcctccgttac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100532

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049690 True 428 processed_transcript 0.54 1 14399225 14399652

Neighbor

gene id symbol gene type direction distance location
XLOC_025152 plppr2a coding upstream 26060 14317802 ~ 14373165 (+)
XLOC_025151 NA coding upstream 111384 14277650 ~ 14287841 (+)
XLOC_025150 si:ch211-108d22.1 coding upstream 138428 14259115 ~ 14260797 (+)
XLOC_025149 NA coding upstream 144460 14251244 ~ 14254765 (+)
XLOC_025148 AL954138.2 coding upstream 150687 14242119 ~ 14248538 (+)
XLOC_025155 cnn1b coding downstream 64289 14463941 ~ 14486959 (+)
XLOC_025156 tmem205 coding downstream 99423 14499075 ~ 14508761 (+)
XLOC_025157 rab3db coding downstream 113018 14512670 ~ 14537576 (+)
XLOC_025158 epor coding downstream 144301 14543953 ~ 14561096 (+)
XLOC_025159 znf653 coding downstream 172161 14571813 ~ 14606118 (+)
XLOC_025429 BX649540.1 misc downstream 15849087 30248739 ~ 30249036 (+)
XLOC_025147 NA non-coding upstream 196706 14201043 ~ 14202519 (+)
XLOC_025145 NA non-coding upstream 325455 14028243 ~ 14073770 (+)
XLOC_025164 NA non-coding downstream 830300 15229952 ~ 15231838 (+)
XLOC_025169 NA non-coding downstream 1105532 15505184 ~ 15506157 (+)
XLOC_025170 NA non-coding downstream 1117900 15517552 ~ 15517899 (+)
XLOC_025172 NA non-coding downstream 1218626 15618278 ~ 15621754 (+)
XLOC_025173 NA non-coding downstream 1239800 15639452 ~ 15646667 (+)

Expression


Co-expression Network