G575990


Basic Information

Item Value
gene id G575990
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12745283 ~ 12745525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656844
cgccttctcAGTCTCACCAGTAGGCTGCTCCATCTGCCTCTCCTGCGGTGACCACGTTGTTTTGGGTGggcctctgggataagatcccatgtccagggtggaggtccgaacaaaggatccgcttcgggaaagttgtattcctggtcgtaatgatgatAAGTTGACGTCGCTTTTATATCCAAAAGtccttcccggctgtatgtaagaacacttgagattttctgggctaacaatgtaagaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU656844 True 243 lncRNA 0.49 1 12745283 12745525

Neighbor

gene id symbol gene type direction distance location
LOC110527311 LOC106575461 coding upstream 51515 12620863 ~ 12693768 (+)
LOC110527308 fam171b coding upstream 151279 12585556 ~ 12594004 (+)
LOC110527093 NA coding upstream 176714 12568176 ~ 12568569 (+)
LOC110527307 LOC106575529 coding upstream 188777 12549201 ~ 12556506 (+)
LOC110528838 LOC106575524 coding upstream 224620 12487901 ~ 12520663 (+)
LOC110527313 LOC106575531 coding downstream 19284 12764809 ~ 12767812 (+)
LOC110527314 LOC106599837 coding downstream 22825 12768350 ~ 12774730 (+)
LOC110527315 LOC106574719 coding downstream 35858 12781383 ~ 12794388 (+)
LOC110527316 LOC106575583 coding downstream 62951 12808476 ~ 12814546 (+)
LOC110527318 LOC106575584 coding downstream 83072 12828597 ~ 12834338 (+)
G575970 NA non-coding upstream 17472 12727547 ~ 12727811 (+)
G575967 NA non-coding upstream 18874 12726107 ~ 12726409 (+)
G575963 NA non-coding upstream 23908 12721124 ~ 12721375 (+)
G575868 NA non-coding upstream 39046 12694002 ~ 12706237 (+)
G575862 NA non-coding upstream 59879 12685073 ~ 12685404 (+)
G575993 NA non-coding downstream 3889 12749414 ~ 12749723 (+)
G575995 NA non-coding downstream 6087 12751612 ~ 12751890 (+)
G575996 NA non-coding downstream 6495 12752020 ~ 12752354 (+)
G576005 NA non-coding downstream 32751 12778276 ~ 12778542 (+)
G576019 NA non-coding downstream 49747 12795272 ~ 12796046 (+)
G575758 NA other upstream 202802 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 276532 12400616 ~ 12474139 (+)
LOC110497002 il8r other upstream 909968 11826502 ~ 11836170 (+)
LOC110495474 LOC106573985 other upstream 995128 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 1247367 11496553 ~ 11498867 (+)
G576160 NA other downstream 427259 13172784 ~ 13173074 (+)
G576161 NA other downstream 427787 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 740991 13486516 ~ 13489737 (+)
G577180 LOC106574637 other downstream 1369811 14115016 ~ 14116345 (+)
LOC110527359 LOC106574634 other downstream 1400545 14146070 ~ 14159585 (+)

Expression


Co-expression Network