G576022


Basic Information

Item Value
gene id G576022
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12807167 ~ 12807430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656886
tggggagcgtcgctgcacagctattttcaggtctctccagagatgttcgatcgggttcaagtccgggctctggctgggccactcaagggcattcagagacttgtcccaaagccactcctttgggacaaggtcctgagtgctctggagtaggttttcatcaaggatctctctgtactttgctccgttcatctttccctcgatcctgactagtgtcccggtccctgctgctgaaaaacatccccacagcataatgctgccaccacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU656886 True 264 lncRNA 0.54 1 12807167 12807430

Neighbor

gene id symbol gene type direction distance location
LOC110527315 LOC106574719 coding upstream 12779 12781383 ~ 12794388 (+)
LOC110527314 LOC106599837 coding upstream 32437 12768350 ~ 12774730 (+)
LOC110527313 LOC106575531 coding upstream 39355 12764809 ~ 12767812 (+)
LOC110527311 LOC106575461 coding upstream 113399 12620863 ~ 12693768 (+)
LOC110527308 fam171b coding upstream 213163 12585556 ~ 12594004 (+)
LOC110527316 LOC106575583 coding downstream 1046 12808476 ~ 12814546 (+)
LOC110527318 LOC106575584 coding downstream 21167 12828597 ~ 12834338 (+)
LOC110527320 LOC106575532 coding downstream 37063 12844493 ~ 12850141 (+)
LOC110527317 LOC106590799 coding downstream 49024 12856454 ~ 12863564 (+)
LOC110528756 LOC106575580 coding downstream 59363 12866793 ~ 12886786 (+)
G576015 NA non-coding upstream 8492 12796502 ~ 12798675 (+)
G576019 NA non-coding upstream 11121 12795272 ~ 12796046 (+)
G576005 NA non-coding upstream 28625 12778276 ~ 12778542 (+)
G575996 NA non-coding upstream 54813 12752020 ~ 12752354 (+)
G575995 NA non-coding upstream 55277 12751612 ~ 12751890 (+)
G576034 NA non-coding downstream 18474 12825904 ~ 12827338 (+)
G576040 NA non-coding downstream 30502 12837932 ~ 12838163 (+)
G576058 donson non-coding downstream 112481 12919911 ~ 12920331 (+)
G576076 NA non-coding downstream 147320 12954750 ~ 12955288 (+)
G576077 NA non-coding downstream 148823 12956253 ~ 12956519 (+)
G575758 NA other upstream 264686 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 338416 12400616 ~ 12474139 (+)
LOC110497002 il8r other upstream 971852 11826502 ~ 11836170 (+)
LOC110495474 LOC106573985 other upstream 1057012 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 1309251 11496553 ~ 11498867 (+)
G576160 NA other downstream 365354 13172784 ~ 13173074 (+)
G576161 NA other downstream 365882 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 679086 13486516 ~ 13489737 (+)
G577180 LOC106574637 other downstream 1307906 14115016 ~ 14116345 (+)
LOC110527359 LOC106574634 other downstream 1338640 14146070 ~ 14159585 (+)

Expression


Co-expression Network