G576085


Basic Information

Item Value
gene id G576085
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12965112 ~ 12965420 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656978
gtcattcatactgcctctgatctggaggactcactaaacagagaacatccctggtcatcactactgcctctgatctggaggactcactaaacagagaacatccctggtcatctccactgcctctgatctggcggactcactaaacagagaacatccctggtcattcctactgcctctgatctggtggactcactaaacagagaacatccctggtcatctctactgcctctgatctggcaggctcactaaacacacatgctttgtttgtaaatgatgtctgagtgttgaagtgtgcccctggccCCTGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU656978 True 309 lncRNA 0.50 1 12965112 12965420

Neighbor

gene id symbol gene type direction distance location
LOC110527322 LOC106574731 coding upstream 52791 12900599 ~ 12912321 (+)
LOC110527323 LOC106575578 coding upstream 64935 12892819 ~ 12900177 (+)
LOC110528756 LOC106575580 coding upstream 78326 12866793 ~ 12886786 (+)
LOC110527317 LOC106590799 coding upstream 101548 12856454 ~ 12863564 (+)
LOC110527320 LOC106575532 coding upstream 114971 12844493 ~ 12850141 (+)
LOC110527327 LOC106575575 coding downstream 90037 13055457 ~ 13058826 (+)
LOC110527329 LOC106574721 coding downstream 110560 13075980 ~ 13090351 (+)
LOC100136184 LOC100136184 coding downstream 151733 13117153 ~ 13130917 (+)
LOC100136183 LOC100380633 coding downstream 170140 13135560 ~ 13149476 (+)
LOC110527332 LOC106575562 coding downstream 402209 13367629 ~ 13371986 (+)
G576084 NA non-coding upstream 372 12964185 ~ 12964740 (+)
G576083 NA non-coding upstream 1507 12962820 ~ 12963605 (+)
G576081 NA non-coding upstream 3736 12961155 ~ 12961376 (+)
G576078 NA non-coding upstream 7178 12956795 ~ 12957934 (+)
G576077 NA non-coding upstream 8593 12956253 ~ 12956519 (+)
G576086 NA non-coding downstream 1480 12966900 ~ 12967499 (+)
G576087 NA non-coding downstream 3294 12968714 ~ 12968987 (+)
G576094 NA non-coding downstream 65314 13030734 ~ 13030969 (+)
G576096 NA non-coding downstream 67899 13033319 ~ 13034731 (+)
G576097 NA non-coding downstream 72453 13037873 ~ 13039421 (+)
G575758 NA other upstream 422631 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 496361 12400616 ~ 12474139 (+)
LOC110497002 il8r other upstream 1129797 11826502 ~ 11836170 (+)
LOC110495474 LOC106573985 other upstream 1214957 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 1467196 11496553 ~ 11498867 (+)
G576160 NA other downstream 207364 13172784 ~ 13173074 (+)
G576161 NA other downstream 207892 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 521096 13486516 ~ 13489737 (+)
G577180 LOC106574637 other downstream 1149916 14115016 ~ 14116345 (+)
LOC110527359 LOC106574634 other downstream 1180650 14146070 ~ 14159585 (+)

Expression


Co-expression Network