G576087


Basic Information

Item Value
gene id G576087
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12968714 ~ 12968987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656980
GAGAAtgaatggagaggagaagaggaggagagagagagaggaaggtcaaAGGTCAGGCTGAAATGAAGAGCGATGTTAAGAACATCCAGTACCAGGTTTTGGTGTTTGTGTGAGTAGGGAATGGAGTAGGAAACGAAAGTTGTGACTTTTAGTGAAGTCAGGAGAGAGaagtttatctgtctgtctccataGAACACGTTTTATCTTTCAGGACAAAACCTTGATGGTGTGAGACTGAGACAAGAGAGAGATTAGACCCTGACTGAAGTCTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU656980 True 274 lncRNA 0.43 1 12968714 12968987

Neighbor

gene id symbol gene type direction distance location
LOC110527322 LOC106574731 coding upstream 56393 12900599 ~ 12912321 (+)
LOC110527323 LOC106575578 coding upstream 68537 12892819 ~ 12900177 (+)
LOC110528756 LOC106575580 coding upstream 81928 12866793 ~ 12886786 (+)
LOC110527317 LOC106590799 coding upstream 105150 12856454 ~ 12863564 (+)
LOC110527320 LOC106575532 coding upstream 118573 12844493 ~ 12850141 (+)
LOC110527327 LOC106575575 coding downstream 86470 13055457 ~ 13058826 (+)
LOC110527329 LOC106574721 coding downstream 106993 13075980 ~ 13090351 (+)
LOC100136184 LOC100136184 coding downstream 148166 13117153 ~ 13130917 (+)
LOC100136183 LOC100380633 coding downstream 166573 13135560 ~ 13149476 (+)
LOC110527332 LOC106575562 coding downstream 398642 13367629 ~ 13371986 (+)
G576086 NA non-coding upstream 1215 12966900 ~ 12967499 (+)
G576085 NA non-coding upstream 3294 12965112 ~ 12965420 (+)
G576084 NA non-coding upstream 3974 12964185 ~ 12964740 (+)
G576083 NA non-coding upstream 5109 12962820 ~ 12963605 (+)
G576081 NA non-coding upstream 7338 12961155 ~ 12961376 (+)
G576094 NA non-coding downstream 61747 13030734 ~ 13030969 (+)
G576096 NA non-coding downstream 64332 13033319 ~ 13034731 (+)
G576097 NA non-coding downstream 68886 13037873 ~ 13039421 (+)
G576106 NA non-coding downstream 78594 13047581 ~ 13047805 (+)
G576107 NA non-coding downstream 80954 13049941 ~ 13050159 (+)
G575758 NA other upstream 426233 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 499963 12400616 ~ 12474139 (+)
LOC110497002 il8r other upstream 1133399 11826502 ~ 11836170 (+)
LOC110495474 LOC106573985 other upstream 1218559 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 1470798 11496553 ~ 11498867 (+)
G576160 NA other downstream 203797 13172784 ~ 13173074 (+)
G576161 NA other downstream 204325 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 517529 13486516 ~ 13489737 (+)
G577180 LOC106574637 other downstream 1146349 14115016 ~ 14116345 (+)
LOC110527359 LOC106574634 other downstream 1177083 14146070 ~ 14159585 (+)

Expression


Co-expression Network