Gene
RNA
| Item | Value |
|---|---|
| gene id | G576106 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 13047581 ~ 13047805 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU657009 | True | 225 | lncRNA | 0.25 | 1 | 13047581 | 13047805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527322 | LOC106574731 | coding | upstream | 135260 | 12900599 ~ 12912321 (+) |
| LOC110527323 | LOC106575578 | coding | upstream | 147404 | 12892819 ~ 12900177 (+) |
| LOC110528756 | LOC106575580 | coding | upstream | 160795 | 12866793 ~ 12886786 (+) |
| LOC110527317 | LOC106590799 | coding | upstream | 184017 | 12856454 ~ 12863564 (+) |
| LOC110527320 | LOC106575532 | coding | upstream | 197440 | 12844493 ~ 12850141 (+) |
| LOC110527327 | LOC106575575 | coding | downstream | 7652 | 13055457 ~ 13058826 (+) |
| LOC110527329 | LOC106574721 | coding | downstream | 28175 | 13075980 ~ 13090351 (+) |
| LOC100136184 | LOC100136184 | coding | downstream | 69348 | 13117153 ~ 13130917 (+) |
| LOC100136183 | LOC100380633 | coding | downstream | 87755 | 13135560 ~ 13149476 (+) |
| LOC110527332 | LOC106575562 | coding | downstream | 319824 | 13367629 ~ 13371986 (+) |
| G576097 | NA | non-coding | upstream | 8160 | 13037873 ~ 13039421 (+) |
| G576096 | NA | non-coding | upstream | 12850 | 13033319 ~ 13034731 (+) |
| G576094 | NA | non-coding | upstream | 16612 | 13030734 ~ 13030969 (+) |
| G576087 | NA | non-coding | upstream | 78594 | 12968714 ~ 12968987 (+) |
| G576086 | NA | non-coding | upstream | 80082 | 12966900 ~ 12967499 (+) |
| G576107 | NA | non-coding | downstream | 2136 | 13049941 ~ 13050159 (+) |
| G576109 | NA | non-coding | downstream | 5055 | 13052860 ~ 13053184 (+) |
| G576173 | NA | non-coding | downstream | 143192 | 13190997 ~ 13212227 (+) |
| G576172 | LOC106575469 | non-coding | downstream | 152686 | 13200491 ~ 13358043 (+) |
| G576188 | NA | non-coding | downstream | 176657 | 13224462 ~ 13228182 (+) |
| G575758 | NA | other | upstream | 505100 | 12542017 ~ 12542481 (+) |
| LOC110528829 | LOC106574706 | other | upstream | 578830 | 12400616 ~ 12474139 (+) |
| LOC110497002 | il8r | other | upstream | 1212266 | 11826502 ~ 11836170 (+) |
| LOC110495474 | LOC106573985 | other | upstream | 1297426 | 11743954 ~ 11750311 (+) |
| LOC118965246 | LOC106574739 | other | upstream | 1549665 | 11496553 ~ 11498867 (+) |
| G576160 | NA | other | downstream | 124979 | 13172784 ~ 13173074 (+) |
| G576161 | NA | other | downstream | 125507 | 13173312 ~ 13207489 (+) |
| G576241 | LOC106575516 | other | downstream | 438711 | 13486516 ~ 13489737 (+) |
| G577180 | LOC106574637 | other | downstream | 1067531 | 14115016 ~ 14116345 (+) |
| LOC110527359 | LOC106574634 | other | downstream | 1098265 | 14146070 ~ 14159585 (+) |
