G576109


Basic Information

Item Value
gene id G576109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13052860 ~ 13053184 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU657012
atctgaggccccatgccaaatattttcagtctcctgagggggaataggttttgttgtgccctcttcacgactgtcaatgccccataatgacaaaatggcaaaaactgttttttttaaattttagatAAAAGCTCCggtggatcctgtttccattgatcatccttgagatgtttctacaacttgattggagtccacctgtgataaattcaattgattggacatgatttggaaaggcacacacctgtctatataaggtcccacagttgacagtgcatgtcagagaaaaaaccaagccatgaggtcggagcacagatctggggaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU657012 True 325 lncRNA 0.43 1 13052860 13053184

Neighbor

gene id symbol gene type direction distance location
LOC110527322 LOC106574731 coding upstream 140539 12900599 ~ 12912321 (+)
LOC110527323 LOC106575578 coding upstream 152683 12892819 ~ 12900177 (+)
LOC110528756 LOC106575580 coding upstream 166074 12866793 ~ 12886786 (+)
LOC110527317 LOC106590799 coding upstream 189296 12856454 ~ 12863564 (+)
LOC110527320 LOC106575532 coding upstream 202719 12844493 ~ 12850141 (+)
LOC110527327 LOC106575575 coding downstream 2273 13055457 ~ 13058826 (+)
LOC110527329 LOC106574721 coding downstream 22796 13075980 ~ 13090351 (+)
LOC100136184 LOC100136184 coding downstream 63969 13117153 ~ 13130917 (+)
LOC100136183 LOC100380633 coding downstream 82376 13135560 ~ 13149476 (+)
LOC110527332 LOC106575562 coding downstream 314445 13367629 ~ 13371986 (+)
G576107 NA non-coding upstream 2701 13049941 ~ 13050159 (+)
G576106 NA non-coding upstream 5055 13047581 ~ 13047805 (+)
G576097 NA non-coding upstream 13439 13037873 ~ 13039421 (+)
G576096 NA non-coding upstream 18129 13033319 ~ 13034731 (+)
G576094 NA non-coding upstream 21891 13030734 ~ 13030969 (+)
G576173 NA non-coding downstream 137813 13190997 ~ 13212227 (+)
G576172 LOC106575469 non-coding downstream 147307 13200491 ~ 13358043 (+)
G576188 NA non-coding downstream 171278 13224462 ~ 13228182 (+)
G576171 NA non-coding downstream 280338 13333522 ~ 13336095 (+)
G576292 NA non-coding downstream 390589 13443773 ~ 13447070 (+)
G575758 NA other upstream 510379 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 584109 12400616 ~ 12474139 (+)
LOC110497002 il8r other upstream 1217545 11826502 ~ 11836170 (+)
LOC110495474 LOC106573985 other upstream 1302705 11743954 ~ 11750311 (+)
LOC118965246 LOC106574739 other upstream 1554944 11496553 ~ 11498867 (+)
G576160 NA other downstream 119600 13172784 ~ 13173074 (+)
G576161 NA other downstream 120128 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 433332 13486516 ~ 13489737 (+)
G577180 LOC106574637 other downstream 1062152 14115016 ~ 14116345 (+)
LOC110527359 LOC106574634 other downstream 1092886 14146070 ~ 14159585 (+)

Expression


Co-expression Network