G576188


Basic Information

Item Value
gene id G576188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13224462 ~ 13228182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU657111
GTTCATTTAGAGTCCACTGAAAGAATGTTCTCATTCTTCCTcgtttttcagaatacaagcctgaaacaatgtctataGACTGTTggaatctagtggaagccataggaactgcaatttgggtCTTATCcaaatacatactgtatagacataGAAAAGTACCCACATCAAaaatatcccacttcctggatggattttcctcaggttttcacctgccatatcagttctgttatactcagacattattttaacagttttcaaaactttagagtgttttctatccaattctaCCATGTACATGCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU657111 True 300 lncRNA 0.36 2 13224462 13228182

Neighbor

gene id symbol gene type direction distance location
LOC100136183 LOC100380633 coding upstream 74986 13135560 ~ 13149476 (+)
LOC100136184 LOC100136184 coding upstream 93545 13117153 ~ 13130917 (+)
LOC110527329 LOC106574721 coding upstream 134111 13075980 ~ 13090351 (+)
LOC110527327 LOC106575575 coding upstream 165636 13055457 ~ 13058826 (+)
LOC110527322 LOC106574731 coding upstream 312141 12900599 ~ 12912321 (+)
LOC110527332 LOC106575562 coding downstream 139447 13367629 ~ 13371986 (+)
LOC110527334 LOC106575514 coding downstream 143555 13371737 ~ 13421278 (+)
LOC110527335 LOC106575499 coding downstream 202341 13430523 ~ 13443490 (+)
LOC110527337 tgds coding downstream 223659 13451841 ~ 13460114 (+)
LOC110528759 LOC106575503 coding downstream 292091 13520273 ~ 13523716 (+)
G576173 NA non-coding upstream 12235 13190997 ~ 13212227 (+)
G576109 NA non-coding upstream 171278 13052860 ~ 13053184 (+)
G576107 NA non-coding upstream 174303 13049941 ~ 13050159 (+)
G576106 NA non-coding upstream 176657 13047581 ~ 13047805 (+)
G576097 NA non-coding upstream 185041 13037873 ~ 13039421 (+)
G576171 NA non-coding downstream 105340 13333522 ~ 13336095 (+)
G576292 NA non-coding downstream 215591 13443773 ~ 13447070 (+)
G576238 NA non-coding downstream 232368 13460550 ~ 13461432 (+)
G576315 NA non-coding downstream 255042 13483224 ~ 13484753 (+)
G576707 NA non-coding downstream 288226 13516408 ~ 13516616 (+)
G576161 NA other upstream 16973 13173312 ~ 13207489 (+)
G576160 NA other upstream 51388 13172784 ~ 13173074 (+)
G575758 NA other upstream 681981 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 755711 12400616 ~ 12474139 (+)
LOC110497002 il8r other upstream 1389147 11826502 ~ 11836170 (+)
G576241 LOC106575516 other downstream 258334 13486516 ~ 13489737 (+)
G577180 LOC106574637 other downstream 887154 14115016 ~ 14116345 (+)
LOC110527359 LOC106574634 other downstream 917888 14146070 ~ 14159585 (+)
G577261 NA other downstream 944341 14172523 ~ 14180064 (+)
LOC118965342 NA other downstream 1002535 14218353 ~ 14230983 (+)

Expression


Co-expression Network