G576315


Basic Information

Item Value
gene id G576315
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13483224 ~ 13484753 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU657267
tggaatcatgtattaaagTGTTaaactcaaaatatattttagatttttcgaAGGAAATAAAAACTGGCGCAACCCAGAATAATAGTTTGTGAGGAGGGgctgactaacggcgaataaactatcaaaataaaataaatcgcacactccatgtataatctcccagcaatttaatgggtatttaccaacgtttcggcatcactgtgccttcctcaggttAACGTCATGAATTATTGAACTAGGTTATGAAGACACACTGCAATTAGTGTAACCAATGAGTGaggtttttcaaagtagccaccctttgccttggtgacagctttgcacacgcttggcattctcttaaccagcttcacctggaatgcttttccaaccgtcttgaaggagttcccacatatgctgagcacttgttggctgcttttccttcactctgcagtccaactcatgctaaaccatctcaattgggttgaggtcaggtgattgtggaggccaggtcatctgatgcagcactccatcactctccttcttggtcaaatagctcttacatagcctggaggtgtgttgggtcattgtcctgttgaaaaacaaatgatagtcccacgaagcgcaaaccagatcagatggcatatcgctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaaatcactgacagtgtcaccagtaaagcacccccacacctcctcctccatgcttcatggtgggaactacacacgcagaacaaaggacagatttccaccggtctaatgtccattgctcatgtttcttgaaccaagcaagtctcttcttcttattggtgtcctttagtagtagtttcttggCAGCAAtcagaccatgaaggcctgatccacgcagtctcctctgaacagttgatgttgagatgtgtctgtaacttgaactctgtgaagcatttatttgggctgtaatttctgaggctggtaactctaatgaacttatcctctgcagcagaggtaactctgggtcttcctttcctgtggcggtcctcagactgcacttgaagaaactttaaaagttcttgaaatgttcgatattgactgactttcatgtcttaaagtaatgatggactgtcatttctcgtggctaatttgagctgttcttgccataatatggacttgataatttaccaaatagggctatcttctgtatacccccctaccttgtcacaacacaactgattggctcaaacgcattaagaaggaaagaaattccacaaatgaacttttaacaaaagtttatcttcaggctgtatcacatccggccgtgattgggagtcccataaggcggcacacaattggtccagcgtcgtccgggtttggccggggtaggccgtctttgtaactaagaatttgttcataactgacttgcctagttaaataaaggttatatataattttttttaacaaggcacaccagttaattgaaatgcattccaagtgactacctcgtgaagctggttgagagagtgtacaaagctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU657267 True 1530 lncRNA 0.43 1 13483224 13484753

Neighbor

gene id symbol gene type direction distance location
LOC110527337 tgds coding upstream 23110 13451841 ~ 13460114 (+)
LOC110527335 LOC106575499 coding upstream 39734 13430523 ~ 13443490 (+)
LOC110527334 LOC106575514 coding upstream 61946 13371737 ~ 13421278 (+)
LOC110527332 LOC106575562 coding upstream 111238 13367629 ~ 13371986 (+)
LOC100136183 LOC100380633 coding upstream 333748 13135560 ~ 13149476 (+)
LOC110528759 LOC106575503 coding downstream 35520 13520273 ~ 13523716 (+)
LOC110527094 NA coding downstream 39747 13524500 ~ 13527438 (+)
LOC110527340 LOC106575504 coding downstream 68342 13553095 ~ 13566497 (+)
ebpl ebpl coding downstream 84557 13569310 ~ 13573701 (+)
LOC110527343 LOC106575507 coding downstream 90096 13574849 ~ 13583653 (+)
G576238 NA non-coding upstream 21792 13460550 ~ 13461432 (+)
G576292 NA non-coding upstream 36154 13443773 ~ 13447070 (+)
G576172 LOC106575469 non-coding upstream 125181 13200491 ~ 13358043 (+)
G576171 NA non-coding upstream 147129 13333522 ~ 13336095 (+)
G576188 NA non-coding upstream 255042 13224462 ~ 13228182 (+)
G576707 NA non-coding downstream 31655 13516408 ~ 13516616 (+)
G576708 NA non-coding downstream 31935 13516688 ~ 13517159 (+)
G576715 NA non-coding downstream 39238 13523991 ~ 13524206 (+)
G576727 NA non-coding downstream 47928 13532681 ~ 13533068 (+)
G576161 NA other upstream 275735 13173312 ~ 13207489 (+)
G576160 NA other upstream 310150 13172784 ~ 13173074 (+)
G575758 NA other upstream 940743 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 1014473 12400616 ~ 12474139 (+)
LOC110497002 il8r other upstream 1647909 11826502 ~ 11836170 (+)
G576241 LOC106575516 other downstream 1763 13486516 ~ 13489737 (+)
G577180 LOC106574637 other downstream 630583 14115016 ~ 14116345 (+)
LOC110527359 LOC106574634 other downstream 661317 14146070 ~ 14159585 (+)
G577261 NA other downstream 687770 14172523 ~ 14180064 (+)
LOC118965342 NA other downstream 745964 14218353 ~ 14230983 (+)

Expression


Co-expression Network